Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm28831-201ENSMUST00000187739 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28200-201ENSMUST00000187778 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29034-201ENSMUST00000188099 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28752-201ENSMUST00000188340 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29378-201ENSMUST00000188723 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28569-201ENSMUST00000188748 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28120-201ENSMUST00000188812 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28369-201ENSMUST00000188993 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28537-201ENSMUST00000189026 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28909-201ENSMUST00000189406 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28861-201ENSMUST00000189681 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29180-201ENSMUST00000190003 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29575-201ENSMUST00000190597 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29631-201ENSMUST00000191065 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm28160-201ENSMUST00000191229 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm29469-201ENSMUST00000191448 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm37404-201ENSMUST00000195726 359 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm37129-201ENSMUST00000195791 315 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm43505-201ENSMUST00000200579 139 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.5□□□□□ -2.17
Srp54bE9PXC0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Srp54bE9PXC0 Gm26135-201ENSMUST00000101993 72 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm22491-201ENSMUST00000157190 102 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm22836-201ENSMUST00000158441 61 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm24277-201ENSMUST00000158661 104 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm26004-201ENSMUST00000158804 116 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm7958-201ENSMUST00000178255 468 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Snord50b-201ENSMUST00000178497 72 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm7950-201ENSMUST00000179633 468 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm29613-201ENSMUST00000185846 313 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm29544-201ENSMUST00000188860 313 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm28808-201ENSMUST00000190978 313 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Mir3535-201ENSMUST00000197651 147 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm19855-201ENSMUST00000210145 249 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Srp54bE9PXC0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm37763-201ENSMUST00000193445 120 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm44308-201ENSMUST00000197080 99 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm25135-201ENSMUST00000082648 143 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm23055-201ENSMUST00000082805 94 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Mir410-201ENSMUST00000083563 81 ntBASIC1.48□□□□□ -2.17
Srp54bE9PXC0 Gm23836-201ENSMUST00000104434 129 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Gm25423-201ENSMUST00000157609 107 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Gm27326-201ENSMUST00000183504 95 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Gm29512-201ENSMUST00000185544 315 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Mir376a-201ENSMUST00000197584 68 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.47□□□□□ -2.17
Srp54bE9PXC0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm26339-201ENSMUST00000102368 99 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm24366-201ENSMUST00000175383 86 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Srp54bE9PXC0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm25793-201ENSMUST00000083287 107 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 Gm25513-201ENSMUST00000083861 162 ntBASIC1.46□□□□□ -2.18
Srp54bE9PXC0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Mir759-201ENSMUST00000103254 98 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Mir767-201ENSMUST00000103256 107 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Mir7675-201ENSMUST00000184262 58 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Gm44858-201ENSMUST00000207360 154 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.45□□□□□ -2.18
Srp54bE9PXC0 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms