Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm23969-201ENSMUST00000083324 74 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm25805-201ENSMUST00000122788 108 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm23619-201ENSMUST00000178411 94 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm25474-201ENSMUST00000179052 94 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm22047-201ENSMUST00000179176 94 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm24518-201ENSMUST00000180275 94 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Mir468-201ENSMUST00000197332 78 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm23370-201ENSMUST00000199545 130 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm43993-201ENSMUST00000203972 247 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm45704-201ENSMUST00000212582 403 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm18113-201ENSMUST00000220630 303 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Col6a4A2AX52 Mir32-201ENSMUST00000083610 70 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm24490-201ENSMUST00000083803 98 ntBASIC0.24□□□□□ -2.37
Col6a4A2AX52 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm24172-201ENSMUST00000104127 117 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm14946-201ENSMUST00000119859 296 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm13729-201ENSMUST00000120328 406 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm26173-201ENSMUST00000158416 136 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm38213-201ENSMUST00000193203 173 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm38333-201ENSMUST00000193608 604 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm43035-201ENSMUST00000197626 517 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Gm9795-201ENSMUST00000062156 693 ntBASIC0.23□□□□□ -2.37
Col6a4A2AX52 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm24726-201ENSMUST00000158232 121 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm24668-201ENSMUST00000158935 104 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Col6a4A2AX52 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm24418-201ENSMUST00000177597 79 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm22114-201ENSMUST00000177756 107 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm24639-201ENSMUST00000178518 79 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm23076-201ENSMUST00000179082 79 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm25077-201ENSMUST00000179157 79 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm27236-201ENSMUST00000184147 442 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm44337-201ENSMUST00000196553 114 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm24527-201ENSMUST00000082920 107 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm23690-201ENSMUST00000083036 94 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm25703-201ENSMUST00000083123 151 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm23114-201ENSMUST00000158478 117 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm26914-201ENSMUST00000182262 223 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm27817-201ENSMUST00000184302 233 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm44455-201ENSMUST00000200061 82 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.22□□□□□ -2.37
Col6a4A2AX52 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Col6a4A2AX52 Mir706-201ENSMUST00000102262 84 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm16358-201ENSMUST00000146046 210 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm23641-201ENSMUST00000157857 101 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm23542-201ENSMUST00000158208 96 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm16404-201ENSMUST00000177739 468 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm7958-201ENSMUST00000178255 468 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm7950-201ENSMUST00000179633 468 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm14598-201ENSMUST00000180109 468 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm14625-201ENSMUST00000180231 468 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm27402-201ENSMUST00000183890 120 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm10193-201ENSMUST00000188288 231 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm44395-201ENSMUST00000197056 153 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm42988-201ENSMUST00000198116 225 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm29848-201ENSMUST00000203107 295 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm44909-201ENSMUST00000208756 165 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm24625-201ENSMUST00000082622 130 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Mir695-201ENSMUST00000102261 109 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Mir872-201ENSMUST00000104728 81 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm14931-201ENSMUST00000111079 253 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm25784-201ENSMUST00000122524 81 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm22887-201ENSMUST00000178586 107 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm27793-201ENSMUST00000183405 76 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm28956-201ENSMUST00000189047 427 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm28921-201ENSMUST00000190219 378 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm18213-201ENSMUST00000207850 178 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm9973-202ENSMUST00000220926 166 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Gm32300-201ENSMUST00000221735 515 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.21□□□□□ -2.38
Col6a4A2AX52 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Col6a4A2AX52 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm26152-201ENSMUST00000157427 101 ntBASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm26116-201ENSMUST00000175600 77 ntBASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm25670-201ENSMUST00000178423 107 ntBASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm26239-201ENSMUST00000178842 107 ntBASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm28435-201ENSMUST00000185496 108 ntBASIC0.2□□□□□ -2.38
Col6a4A2AX52 Gm29352-201ENSMUST00000188054 544 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms