Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm25434-201ENSMUST00000158278 167 ntBASIC0.7□□□□□ -2.3
Trav12-2A0N8N6 Gm26652-202ENSMUST00000181672 475 ntBASIC0.7□□□□□ -2.3
Trav12-2A0N8N6 Gm46993-201ENSMUST00000220708 259 ntBASIC0.7□□□□□ -2.3
Trav12-2A0N8N6 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.7□□□□□ -2.3
Trav12-2A0N8N6 Mir196b-201ENSMUST00000083509 85 ntBASIC0.7□□□□□ -2.3
Trav12-2A0N8N6 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm20257-202ENSMUST00000188643 130 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm44325-201ENSMUST00000196757 77 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm24150-201ENSMUST00000082759 104 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Gm22685-201ENSMUST00000082848 106 ntBASIC0.69□□□□□ -2.3
Trav12-2A0N8N6 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm23766-201ENSMUST00000103894 80 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm14846-201ENSMUST00000121868 216 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm23329-201ENSMUST00000157415 108 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm24401-201ENSMUST00000157868 91 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm23760-201ENSMUST00000158350 116 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm25715-201ENSMUST00000158627 125 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm25750-201ENSMUST00000175483 112 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm28408-201ENSMUST00000191557 463 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm43911-201ENSMUST00000203097 76 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm23735-201ENSMUST00000082551 134 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm24035-201ENSMUST00000082867 107 ntBASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav12-2A0N8N6 Gm12225-201ENSMUST00000117995 298 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm11859-201ENSMUST00000118099 455 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm14782-201ENSMUST00000120151 195 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm26004-201ENSMUST00000158804 116 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm20630-201ENSMUST00000177387 551 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm23191-201ENSMUST00000179147 107 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm26180-201ENSMUST00000179942 107 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm26968-201ENSMUST00000182894 481 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Mir7663-201ENSMUST00000183950 61 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm28862-201ENSMUST00000188246 163 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm37801-201ENSMUST00000194754 274 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm8125-201ENSMUST00000216602 738 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm24037-201ENSMUST00000082871 180 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm23721-201ENSMUST00000083005 107 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm24163-201ENSMUST00000093660 132 ntBASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav12-2A0N8N6 Gm24579-201ENSMUST00000103964 144 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Gm22199-201ENSMUST00000122660 126 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Gm18291-201ENSMUST00000190791 301 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Gm38323-201ENSMUST00000192450 210 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Gm10264-201ENSMUST00000220589 429 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Gm22884-201ENSMUST00000083127 140 ntBASIC0.66□□□□□ -2.3
Trav12-2A0N8N6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm11794-201ENSMUST00000119446 237 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm23542-201ENSMUST00000158208 96 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm23660-201ENSMUST00000178362 79 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm24088-201ENSMUST00000179100 79 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm44326-201ENSMUST00000198226 101 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm24523-201ENSMUST00000083965 132 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.65□□□□□ -2.31
Trav12-2A0N8N6 Gm24271-201ENSMUST00000102327 111 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm12433-201ENSMUST00000119659 255 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm25909-201ENSMUST00000157619 121 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm24853-201ENSMUST00000158026 121 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm25166-201ENSMUST00000158909 111 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Cfap61-214ENSMUST00000167179 183 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Mir7059-201ENSMUST00000184825 59 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm44396-201ENSMUST00000199843 114 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.64□□□□□ -2.31
Trav12-2A0N8N6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm25506-201ENSMUST00000104339 70 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm26914-201ENSMUST00000182262 223 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm42533-201ENSMUST00000196247 157 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm23627-201ENSMUST00000082459 107 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm22502-201ENSMUST00000082488 107 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm24311-201ENSMUST00000082570 104 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm22977-201ENSMUST00000082615 107 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm24149-201ENSMUST00000082757 107 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Gm25578-201ENSMUST00000083406 104 ntBASIC0.63□□□□□ -2.31
Trav12-2A0N8N6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Gm27894-201ENSMUST00000184177 92 ntBASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Gm25697-201ENSMUST00000082902 98 ntBASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Gm22704-201ENSMUST00000083027 137 ntBASIC0.62□□□□□ -2.31
Trav12-2A0N8N6 Snord32a-201ENSMUST00000083285 83 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 182.7 ms