Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22450-201ENSMUST00000179641 107 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm25473-201ENSMUST00000180191 107 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm24856-201ENSMUST00000082809 107 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm26071-201ENSMUST00000083261 107 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Gm24521-201ENSMUST00000083958 107 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 Snora33-201ENSMUST00000093556 129 ntBASIC1.7□□□□□ -2.14
H2afb1S4R1E0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm22784-201ENSMUST00000104088 132 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm24283-201ENSMUST00000104233 107 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm22674-201ENSMUST00000104413 131 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Mir344e-201ENSMUST00000104677 66 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm26156-201ENSMUST00000116999 123 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm12797-201ENSMUST00000118645 273 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm16328-201ENSMUST00000126985 196 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm24440-201ENSMUST00000157236 63 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm22221-201ENSMUST00000157362 103 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm24837-201ENSMUST00000158683 81 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm24512-201ENSMUST00000174963 65 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm26864-201ENSMUST00000181346 156 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Mir6379-201ENSMUST00000183392 115 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm28849-201ENSMUST00000188127 174 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm28330-201ENSMUST00000190353 171 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm18546-201ENSMUST00000197245 676 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm44256-201ENSMUST00000203304 335 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm44533-201ENSMUST00000207782 268 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm45365-201ENSMUST00000209489 256 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm26495-201ENSMUST00000083152 137 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Gm26175-201ENSMUST00000083794 131 ntBASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
H2afb1S4R1E0 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm27443-201ENSMUST00000184660 98 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Snord43-201ENSMUST00000199549 108 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm24966-201ENSMUST00000082443 79 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm24977-201ENSMUST00000083106 163 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm24042-201ENSMUST00000083114 103 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gm22972-201ENSMUST00000083297 131 ntBASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
H2afb1S4R1E0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm25168-201ENSMUST00000104189 132 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm12143-201ENSMUST00000119666 332 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm24632-201ENSMUST00000122770 323 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm23536-201ENSMUST00000157541 134 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm26287-201ENSMUST00000158887 81 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm22118-201ENSMUST00000175593 171 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Snora15-201ENSMUST00000177461 131 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Mir7021-201ENSMUST00000197026 63 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm35736-201ENSMUST00000203681 313 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm5899-201ENSMUST00000071770 270 ntBASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
H2afb1S4R1E0 Gm24079-201ENSMUST00000104352 132 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm24835-201ENSMUST00000116777 111 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm11936-201ENSMUST00000118323 160 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm23391-201ENSMUST00000157579 104 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm25184-201ENSMUST00000157753 163 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm24277-201ENSMUST00000158661 104 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Mir7081-201ENSMUST00000184490 75 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm37089-201ENSMUST00000195616 129 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm44352-201ENSMUST00000196358 110 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Gm45859-201ENSMUST00000212794 214 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Mir29c-201ENSMUST00000083614 88 ntBASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
H2afb1S4R1E0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
H2afb1S4R1E0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.65□□□□□ -2.14
H2afb1S4R1E0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm24423-201ENSMUST00000101982 106 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Mir881-201ENSMUST00000104844 78 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm23551-201ENSMUST00000116852 121 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm22338-201ENSMUST00000157715 129 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm25371-201ENSMUST00000158162 101 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm24656-201ENSMUST00000177548 132 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm25235-201ENSMUST00000179933 107 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm27402-201ENSMUST00000183890 120 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm27545-201ENSMUST00000184755 202 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms