Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26493-201ENSMUST00000083155 136 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.4□□□□□ -2.19
Trim3Q9R1R2 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm23656-201ENSMUST00000122626 112 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm22027-201ENSMUST00000122737 127 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm23232-201ENSMUST00000157300 105 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm23355-201ENSMUST00000177614 107 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm23148-201ENSMUST00000180367 107 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm28992-201ENSMUST00000190534 139 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm44419-201ENSMUST00000203338 229 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm25258-201ENSMUST00000083049 107 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Mir221-201ENSMUST00000083488 95 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Gm26107-201ENSMUST00000083972 107 ntBASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trim3Q9R1R2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm22935-201ENSMUST00000103960 104 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm12143-201ENSMUST00000119666 332 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm14937-201ENSMUST00000119709 208 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm24630-201ENSMUST00000122768 106 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm23390-201ENSMUST00000157393 106 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm23262-201ENSMUST00000158323 168 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm23474-201ENSMUST00000158884 75 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm22114-201ENSMUST00000177756 107 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Mir3087-201ENSMUST00000199405 56 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm25078-201ENSMUST00000082530 107 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm25357-201ENSMUST00000082745 72 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Gm23412-201ENSMUST00000083017 107 ntBASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trim3Q9R1R2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm23013-201ENSMUST00000104146 106 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm11572-201ENSMUST00000119164 120 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm11606-201ENSMUST00000120706 617 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm14298-201ENSMUST00000139032 237 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm16356-201ENSMUST00000143300 169 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm25831-201ENSMUST00000158924 163 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm17113-201ENSMUST00000170118 171 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm24510-201ENSMUST00000174965 94 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm7258-201ENSMUST00000179317 300 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm25284-201ENSMUST00000180345 141 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm37338-201ENSMUST00000191986 127 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm36946-201ENSMUST00000192706 435 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm44063-201ENSMUST00000203307 376 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Gm44473-201ENSMUST00000204039 152 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trim3Q9R1R2 Mir759-201ENSMUST00000103254 98 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm23907-201ENSMUST00000104595 189 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm24275-201ENSMUST00000116780 146 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm23221-201ENSMUST00000158118 93 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm24902-201ENSMUST00000158126 123 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm22836-201ENSMUST00000158441 61 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm29107-201ENSMUST00000190910 347 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm37693-201ENSMUST00000194562 234 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Gm5010-201ENSMUST00000213131 260 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.36□□□□□ -2.19
Trim3Q9R1R2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm26080-201ENSMUST00000104069 131 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm12647-201ENSMUST00000118977 265 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm22215-201ENSMUST00000157558 96 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm23024-201ENSMUST00000158770 292 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm24668-201ENSMUST00000158935 104 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm26968-201ENSMUST00000182894 481 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm27540-201ENSMUST00000184950 187 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm45116-201ENSMUST00000207392 275 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.35□□□□□ -2.19
Trim3Q9R1R2 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trim3Q9R1R2 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Mir293-201ENSMUST00000104841 80 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm22537-201ENSMUST00000158172 199 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm24277-201ENSMUST00000158661 104 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm24818-201ENSMUST00000175093 161 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm27493-201ENSMUST00000184128 78 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms