Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm23767-201ENSMUST00000179278 94 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Gm22263-201ENSMUST00000180060 104 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Gm9472-201ENSMUST00000221625 526 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 AC154730.1-201ENSMUST00000227874 816 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Gm24002-201ENSMUST00000158456 104 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.75□□□□□ -2.53
Scn11aQ9R053 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-0.75□□□□□ -2.53
Scn11aQ9R053 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.76□□□□□ -2.53
Scn11aQ9R053 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.76□□□□□ -2.53
Scn11aQ9R053 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.76□□□□□ -2.53
Scn11aQ9R053 Mir6355-201ENSMUST00000183687 106 ntBASIC-0.76□□□□□ -2.53
Scn11aQ9R053 Gm25126-201ENSMUST00000083343 102 ntBASIC-0.76□□□□□ -2.53
Scn11aQ9R053 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.77□□□□□ -2.53
Scn11aQ9R053 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.77□□□□□ -2.53
Scn11aQ9R053 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.77□□□□□ -2.53
Scn11aQ9R053 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.77□□□□□ -2.53
Scn11aQ9R053 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.77□□□□□ -2.53
Scn11aQ9R053 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
Scn11aQ9R053 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm21726-201ENSMUST00000179654 392 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm24464-201ENSMUST00000179697 107 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm43914-201ENSMUST00000203592 594 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Snord69-201ENSMUST00000104024 80 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 AC163033.1-201ENSMUST00000218608 157 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm5899-201ENSMUST00000071770 270 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.78□□□□□ -2.53
Scn11aQ9R053 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Gm14358-201ENSMUST00000118458 403 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.79□□□□□ -2.54
Scn11aQ9R053 Gm25647-201ENSMUST00000101832 78 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm25823-201ENSMUST00000101995 78 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm14887-201ENSMUST00000119522 663 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm24220-201ENSMUST00000177753 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm25988-201ENSMUST00000177759 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm23471-201ENSMUST00000177886 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm26488-201ENSMUST00000178225 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm23449-201ENSMUST00000179208 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm25221-201ENSMUST00000180051 79 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-0.8□□□□□ -2.54
Scn11aQ9R053 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm44324-201ENSMUST00000198517 135 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.8□□□□□ -2.54
Scn11aQ9R053 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm12591-201ENSMUST00000122407 1177 ntBASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm23829-201ENSMUST00000157392 270 ntBASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm23331-201ENSMUST00000157423 108 ntBASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.81□□□□□ -2.54
Scn11aQ9R053 Gm22193-201ENSMUST00000116868 76 ntBASIC-0.82□□□□□ -2.54
Scn11aQ9R053 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.82□□□□□ -2.54
Scn11aQ9R053 Gm24839-201ENSMUST00000122602 107 ntBASIC-0.82□□□□□ -2.54
Scn11aQ9R053 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.82□□□□□ -2.54
Scn11aQ9R053 Gm29815-201ENSMUST00000202418 178 ntBASIC-0.82□□□□□ -2.54
Scn11aQ9R053 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm29216-201ENSMUST00000187117 492 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm18340-201ENSMUST00000196342 609 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 AC140477.1-201ENSMUST00000222354 246 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.83□□□□□ -2.54
Scn11aQ9R053 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC-0.83□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 169.7 ms