Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm22216-201ENSMUST00000157557 114 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm26405-201ENSMUST00000158495 100 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm28992-201ENSMUST00000190534 139 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm43427-201ENSMUST00000198188 331 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Mir7227-201ENSMUST00000200408 59 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm14709-201ENSMUST00000121225 304 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm13725-201ENSMUST00000122139 207 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm23214-201ENSMUST00000122716 157 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm8121-201ENSMUST00000153583 499 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm26150-201ENSMUST00000157426 151 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm24501-201ENSMUST00000158452 62 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm7958-201ENSMUST00000178255 468 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm22448-201ENSMUST00000179254 107 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm7950-201ENSMUST00000179633 468 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm27540-201ENSMUST00000184950 187 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm37801-201ENSMUST00000194754 274 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Gm44373-201ENSMUST00000196112 169 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Cpsf3Q9QXK7 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm23230-201ENSMUST00000157298 133 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm22217-201ENSMUST00000157556 313 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Snord87-201ENSMUST00000175437 87 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm44491-201ENSMUST00000196794 96 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Mir3535-201ENSMUST00000197651 147 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm45456-201ENSMUST00000210841 243 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm24316-201ENSMUST00000083041 107 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm26493-201ENSMUST00000083155 136 ntBASIC1.8□□□□□ -2.12
Cpsf3Q9QXK7 Gm24116-201ENSMUST00000103975 107 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm26181-201ENSMUST00000157687 106 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm22665-201ENSMUST00000158720 275 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm29818-201ENSMUST00000218070 165 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm23055-201ENSMUST00000082805 94 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm24536-201ENSMUST00000083144 107 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Mir148b-201ENSMUST00000083626 97 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm24764-201ENSMUST00000083686 199 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.79□□□□□ -2.12
Cpsf3Q9QXK7 Gm24632-201ENSMUST00000122770 323 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm22315-201ENSMUST00000158010 143 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Rnu7-201ENSMUST00000158458 62 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm24510-201ENSMUST00000174965 94 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm25730-201ENSMUST00000178753 165 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm42594-201ENSMUST00000199511 246 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm23100-201ENSMUST00000083455 141 ntBASIC1.78□□□□□ -2.12
Cpsf3Q9QXK7 Gm23941-201ENSMUST00000101953 107 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm25491-201ENSMUST00000158733 308 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm20477-201ENSMUST00000174028 280 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm27905-201ENSMUST00000184005 207 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Mir6388-201ENSMUST00000184417 75 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Mir3569-201ENSMUST00000185080 58 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm28383-201ENSMUST00000187563 139 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm29262-201ENSMUST00000190084 196 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm18433-201ENSMUST00000192747 197 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm42834-201ENSMUST00000196845 256 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm45005-201ENSMUST00000206640 157 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm45543-201ENSMUST00000209327 88 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Snord118-201ENSMUST00000082965 135 ntBASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Cpsf3Q9QXK7 Mir873a-201ENSMUST00000104863 77 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm11322-201ENSMUST00000118095 435 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm13967-201ENSMUST00000120404 380 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm23854-201ENSMUST00000158378 108 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm26402-201ENSMUST00000158499 113 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm9156-201ENSMUST00000189660 463 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm37763-201ENSMUST00000193445 120 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm43035-201ENSMUST00000197626 517 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm45754-201ENSMUST00000212380 279 ntBASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.76□□□□□ -2.13
Cpsf3Q9QXK7 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Mir223-201ENSMUST00000102112 110 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Gm23011-201ENSMUST00000104148 132 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Gm27723-201ENSMUST00000157398 63 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Gm22011-201ENSMUST00000158790 123 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Gm28453-203ENSMUST00000187041 189 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 188.6 ms