Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm23682-201ENSMUST00000178146 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24652-201ENSMUST00000178223 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm22629-201ENSMUST00000178272 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24021-201ENSMUST00000178435 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm22274-201ENSMUST00000178441 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm22050-201ENSMUST00000178442 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm23688-201ENSMUST00000178502 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm23944-201ENSMUST00000178607 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm26283-201ENSMUST00000178625 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm25452-201ENSMUST00000178776 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm23286-201ENSMUST00000178963 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm22640-201ENSMUST00000179035 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm25984-201ENSMUST00000179129 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm25585-201ENSMUST00000179469 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm26374-201ENSMUST00000179737 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24040-201ENSMUST00000179786 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm25017-201ENSMUST00000179805 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm23618-201ENSMUST00000179912 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm26284-201ENSMUST00000180107 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm22756-201ENSMUST00000180118 107 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24570-201ENSMUST00000180314 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24654-201ENSMUST00000180315 79 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm27582-201ENSMUST00000184084 126 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm28409-201ENSMUST00000187064 103 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm28912-201ENSMUST00000189001 234 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm44393-201ENSMUST00000197418 138 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Sec61a2Q9JLR1 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm4945-201ENSMUST00000075152 453 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm26054-201ENSMUST00000083037 107 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Mir340-201ENSMUST00000083483 98 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Mir186-201ENSMUST00000083497 71 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Gm24492-201ENSMUST00000083798 107 ntBASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Sec61a2Q9JLR1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Mir499-201ENSMUST00000102357 79 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm22270-201ENSMUST00000104034 132 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm16021-201ENSMUST00000121176 219 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm11471-201ENSMUST00000121824 198 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm25980-201ENSMUST00000157176 218 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm24717-201ENSMUST00000157522 124 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm25888-201ENSMUST00000157778 302 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm26360-201ENSMUST00000158872 103 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm29613-201ENSMUST00000185846 313 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm29544-201ENSMUST00000188860 313 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm6801-201ENSMUST00000190697 339 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm28808-201ENSMUST00000190978 313 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm38298-201ENSMUST00000193578 118 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Mir3969-201ENSMUST00000197106 92 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm44326-201ENSMUST00000198226 101 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm45288-201ENSMUST00000210236 151 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm8508-201ENSMUST00000061226 363 ntBASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Sec61a2Q9JLR1 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm22935-201ENSMUST00000103960 104 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm11285-201ENSMUST00000118443 322 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm24627-201ENSMUST00000122764 138 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm23895-201ENSMUST00000158108 160 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm22612-201ENSMUST00000158293 101 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm24634-201ENSMUST00000158672 107 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm4479-201ENSMUST00000178807 171 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm19563-201ENSMUST00000222031 270 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Sec61a2Q9JLR1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm23747-201ENSMUST00000104228 131 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm26011-201ENSMUST00000104410 104 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm23588-201ENSMUST00000157659 99 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm24573-201ENSMUST00000175499 112 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm24461-201ENSMUST00000082735 103 ntBASIC2.52□□□□□ -2.01
Sec61a2Q9JLR1 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.51□□□□□ -2.01
Sec61a2Q9JLR1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms