Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm28409-201ENSMUST00000187064 103 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm21064-202ENSMUST00000190583 278 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm43521-201ENSMUST00000197838 255 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm43107-201ENSMUST00000198729 255 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Gm22972-201ENSMUST00000083297 131 ntBASIC2.53□□□□□ -2
Ldb3Q9JKS4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ldb3Q9JKS4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ldb3Q9JKS4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Ldb3Q9JKS4 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm22935-201ENSMUST00000103960 104 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Snord90-201ENSMUST00000104568 111 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm13885-201ENSMUST00000117569 187 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm11285-201ENSMUST00000118443 322 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm24879-201ENSMUST00000158386 143 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm28912-201ENSMUST00000189001 234 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Gm22681-201ENSMUST00000083853 106 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.52□□□□□ -2.01
Ldb3Q9JKS4 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm25500-201ENSMUST00000104426 123 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm25980-201ENSMUST00000157176 218 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm23381-201ENSMUST00000157676 94 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm26360-201ENSMUST00000158872 103 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Mir3969-201ENSMUST00000197106 92 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm19563-201ENSMUST00000222031 270 ntBASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ldb3Q9JKS4 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm22003-201ENSMUST00000101885 107 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm23772-201ENSMUST00000104433 102 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm23668-201ENSMUST00000157465 111 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm24717-201ENSMUST00000157522 124 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm24010-201ENSMUST00000157731 282 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm22330-201ENSMUST00000158068 115 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm26157-201ENSMUST00000158974 126 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm22756-201ENSMUST00000180118 107 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Mir7242-201ENSMUST00000183710 79 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm29613-201ENSMUST00000185846 313 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm29544-201ENSMUST00000188860 313 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm28808-201ENSMUST00000190978 313 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm44326-201ENSMUST00000198226 101 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm26458-201ENSMUST00000082832 128 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm26054-201ENSMUST00000083037 107 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Mir193a-201ENSMUST00000083461 66 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm24492-201ENSMUST00000083798 107 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Ldb3Q9JKS4 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm22105-201ENSMUST00000116734 116 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm11253-201ENSMUST00000118486 201 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm12213-201ENSMUST00000119924 353 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm13862-201ENSMUST00000121220 197 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm23080-201ENSMUST00000157846 103 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm22612-201ENSMUST00000158293 101 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm23858-201ENSMUST00000158384 106 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm23197-201ENSMUST00000158809 112 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm44600-201ENSMUST00000208540 111 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm24461-201ENSMUST00000082735 103 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.49□□□□□ -2.01
Ldb3Q9JKS4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm6954-201ENSMUST00000117416 225 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm14626-201ENSMUST00000117619 216 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm12513-201ENSMUST00000118617 352 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm22221-201ENSMUST00000157362 103 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm23665-201ENSMUST00000158054 62 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm23409-201ENSMUST00000158516 237 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm20438-201ENSMUST00000174441 329 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm24390-201ENSMUST00000179578 62 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm37116-201ENSMUST00000195161 147 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm44482-201ENSMUST00000199232 103 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm23246-201ENSMUST00000083371 67 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.48□□□□□ -2.01
Ldb3Q9JKS4 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.47□□□□□ -2.01
Ldb3Q9JKS4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ldb3Q9JKS4 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms