Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm45704-201ENSMUST00000212582 403 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm22884-201ENSMUST00000083127 140 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Mir33-201ENSMUST00000083531 69 ntBASIC0.84□□□□□ -2.27
Trem1Q9JKE2 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.84□□□□□ -2.28
Trem1Q9JKE2 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.84□□□□□ -2.28
Trem1Q9JKE2 Gm23705-201ENSMUST00000104370 130 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm11522-201ENSMUST00000120533 176 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm26968-201ENSMUST00000182894 481 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm28862-201ENSMUST00000188246 163 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm37801-201ENSMUST00000194754 274 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm42533-201ENSMUST00000196247 157 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm42855-201ENSMUST00000197388 253 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm43220-201ENSMUST00000199299 282 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm24355-201ENSMUST00000082858 122 ntBASIC0.83□□□□□ -2.28
Trem1Q9JKE2 Gm25414-201ENSMUST00000101814 107 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm22750-201ENSMUST00000102076 103 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm25559-201ENSMUST00000157182 74 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm24638-201ENSMUST00000179807 132 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm19123-201ENSMUST00000190716 651 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.82□□□□□ -2.28
Trem1Q9JKE2 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm25650-201ENSMUST00000083784 162 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.82□□□□□ -2.28
Trem1Q9JKE2 Gm14846-201ENSMUST00000121868 216 ntBASIC0.81□□□□□ -2.28
Trem1Q9JKE2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
Trem1Q9JKE2 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.81□□□□□ -2.28
Trem1Q9JKE2 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.81□□□□□ -2.28
Trem1Q9JKE2 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.81□□□□□ -2.28
Trem1Q9JKE2 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.81□□□□□ -2.28
Trem1Q9JKE2 Gm22544-201ENSMUST00000104349 127 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Gm11386-201ENSMUST00000117761 347 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Gm11794-201ENSMUST00000119446 237 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Gm23083-201ENSMUST00000157851 116 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Mir3098-201ENSMUST00000175416 87 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Gm44358-201ENSMUST00000196301 98 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Gm44325-201ENSMUST00000196757 77 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.8□□□□□ -2.28
Trem1Q9JKE2 Mir301b-201ENSMUST00000102333 97 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm12433-201ENSMUST00000119659 255 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm25544-201ENSMUST00000122676 120 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm15899-201ENSMUST00000128586 238 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm24487-201ENSMUST00000178017 63 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm24523-201ENSMUST00000083965 132 ntBASIC0.79□□□□□ -2.28
Trem1Q9JKE2 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm15379-201ENSMUST00000121224 648 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm25052-201ENSMUST00000122661 158 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm22556-201ENSMUST00000157803 100 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm26029-201ENSMUST00000158659 132 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm26004-201ENSMUST00000158804 116 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm25750-201ENSMUST00000175483 112 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm44326-201ENSMUST00000198226 101 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm8125-201ENSMUST00000216602 738 ntBASIC0.78□□□□□ -2.28
Trem1Q9JKE2 Gm26393-201ENSMUST00000157625 129 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Gm26914-201ENSMUST00000182262 223 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Gm27755-201ENSMUST00000184623 132 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Gm18291-201ENSMUST00000190791 301 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Gm24311-201ENSMUST00000082570 104 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.77□□□□□ -2.29
Trem1Q9JKE2 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 Gm13588-201ENSMUST00000120026 135 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 Gm24401-201ENSMUST00000157868 91 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 Gm23191-201ENSMUST00000179147 107 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 Mir7225-201ENSMUST00000184178 54 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
Trem1Q9JKE2 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.76□□□□□ -2.29
Trem1Q9JKE2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm26135-201ENSMUST00000101993 72 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm26338-201ENSMUST00000102372 110 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm22780-201ENSMUST00000104084 132 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm11859-201ENSMUST00000118099 455 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm16032-201ENSMUST00000118534 168 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm22199-201ENSMUST00000122660 126 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Snord50b-201ENSMUST00000178497 72 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm22685-201ENSMUST00000082848 106 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm23721-201ENSMUST00000083005 107 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Mir362-201ENSMUST00000093592 65 ntBASIC0.75□□□□□ -2.29
Trem1Q9JKE2 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm26500-201ENSMUST00000101867 106 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Mir695-201ENSMUST00000102261 109 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm12225-201ENSMUST00000117995 298 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms