Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm24476-201ENSMUST00000157437 131 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm22706-201ENSMUST00000157907 112 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm26501-201ENSMUST00000178307 107 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm27793-201ENSMUST00000183405 76 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm27313-201ENSMUST00000183500 142 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm29229-201ENSMUST00000188874 323 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm37918-201ENSMUST00000192071 120 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm44392-201ENSMUST00000196758 115 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm25513-201ENSMUST00000083861 162 ntBASIC0.19□□□□□ -2.38
Trem3Q9JKE1 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm11512-201ENSMUST00000119669 663 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm26278-201ENSMUST00000157098 132 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm22572-201ENSMUST00000082985 105 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm23093-201ENSMUST00000083450 102 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm23731-201ENSMUST00000083749 107 ntBASIC0.18□□□□□ -2.38
Trem3Q9JKE1 Gm22983-201ENSMUST00000158308 104 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Mir1961-201ENSMUST00000158643 112 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm23340-201ENSMUST00000158955 123 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm9593-201ENSMUST00000166034 469 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm23269-201ENSMUST00000178701 107 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm27817-201ENSMUST00000184302 233 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Mir468-201ENSMUST00000197332 78 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm43220-201ENSMUST00000199299 282 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm24966-201ENSMUST00000082443 79 ntBASIC0.17□□□□□ -2.38
Trem3Q9JKE1 Gm25643-201ENSMUST00000158874 103 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm26285-201ENSMUST00000177923 107 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm27365-201ENSMUST00000184041 177 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm45815-201ENSMUST00000220241 146 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm33654-201ENSMUST00000221704 215 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm23622-201ENSMUST00000082460 107 ntBASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Trem3Q9JKE1 Gm14296-202ENSMUST00000108931 750 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm14946-201ENSMUST00000119859 296 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm14761-201ENSMUST00000121363 262 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm25783-201ENSMUST00000122525 190 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm25968-201ENSMUST00000157167 100 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm23557-201ENSMUST00000157820 138 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm24191-201ENSMUST00000157977 122 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm24277-201ENSMUST00000158661 104 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm21894-201ENSMUST00000179631 546 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm20923-201ENSMUST00000190009 319 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm21088-201ENSMUST00000190875 316 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.15□□□□□ -2.39
Trem3Q9JKE1 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.15□□□□□ -2.39
Trem3Q9JKE1 Mir872-201ENSMUST00000104728 81 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm12143-201ENSMUST00000119666 332 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm13577-201ENSMUST00000121365 205 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm24111-201ENSMUST00000175491 97 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Mir8090-201ENSMUST00000185078 136 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm28926-201ENSMUST00000191063 680 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm37641-201ENSMUST00000193837 239 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm43810-201ENSMUST00000201018 232 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm29817-201ENSMUST00000210098 172 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Snord68-201ENSMUST00000082516 86 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm26066-201ENSMUST00000083385 109 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Mir490-201ENSMUST00000093567 84 ntBASIC0.14□□□□□ -2.39
Trem3Q9JKE1 Gm12837-201ENSMUST00000120131 373 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Gm24198-201ENSMUST00000157812 108 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Gm25121-201ENSMUST00000179846 79 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Gm27475-201ENSMUST00000183420 61 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Gm25697-201ENSMUST00000082902 98 ntBASIC0.13□□□□□ -2.39
Trem3Q9JKE1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Snord71-201ENSMUST00000104361 85 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Gm24517-201ENSMUST00000122560 107 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Gm23435-201ENSMUST00000157183 156 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Mir7009-201ENSMUST00000184519 64 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms