Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm22093-201ENSMUST00000158980 111 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Gm18991-201ENSMUST00000209225 746 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
Copb1Q9JIF7 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm23551-201ENSMUST00000116852 121 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm15536-201ENSMUST00000121411 114 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm24896-201ENSMUST00000122741 135 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm25834-201ENSMUST00000158916 101 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm27699-201ENSMUST00000183553 180 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm27369-201ENSMUST00000185182 71 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm43563-201ENSMUST00000196761 198 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Gm26126-201ENSMUST00000083188 164 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Mir340-201ENSMUST00000083483 98 ntBASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Copb1Q9JIF7 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm24283-201ENSMUST00000104233 107 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm14588-201ENSMUST00000119895 172 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm26105-201ENSMUST00000157253 190 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Mir1967-201ENSMUST00000157789 82 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm17052-201ENSMUST00000165496 289 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm24573-201ENSMUST00000175499 112 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm25820-202ENSMUST00000197479 128 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Gm24625-201ENSMUST00000082622 130 ntBASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Copb1Q9JIF7 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm22281-201ENSMUST00000157198 103 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm23381-201ENSMUST00000157676 94 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm25888-201ENSMUST00000157778 302 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm25642-201ENSMUST00000175137 66 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm24813-201ENSMUST00000175310 84 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm25933-201ENSMUST00000178943 108 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm37918-201ENSMUST00000192071 120 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm44478-201ENSMUST00000204875 114 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Copb1Q9JIF7 Gm13885-201ENSMUST00000117569 187 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm22099-201ENSMUST00000157925 123 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm24053-201ENSMUST00000158620 105 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm17113-201ENSMUST00000170118 171 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm27585-201ENSMUST00000183717 199 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm44352-201ENSMUST00000196358 110 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Mir1291-201ENSMUST00000199842 117 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Mir497-201ENSMUST00000200557 84 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Snora19-201ENSMUST00000082962 132 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Snord47-201ENSMUST00000083034 77 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm23658-201ENSMUST00000083233 132 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Snora34-201ENSMUST00000083402 138 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Gm10360-201ENSMUST00000097219 272 ntBASIC2.35□□□□□ -2.03
Copb1Q9JIF7 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Gm26135-201ENSMUST00000101993 72 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Gm12512-201ENSMUST00000119620 217 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Snord11-201ENSMUST00000158468 84 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Snord50b-201ENSMUST00000178497 72 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Gm25253-201ENSMUST00000179958 107 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Gm42834-201ENSMUST00000196845 256 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.34□□□□□ -2.03
Copb1Q9JIF7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm24440-201ENSMUST00000157236 63 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm22217-201ENSMUST00000157556 313 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm6788-201ENSMUST00000166459 270 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm24512-201ENSMUST00000174963 65 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm20613-201ENSMUST00000175828 345 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm24977-201ENSMUST00000083106 163 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.33□□□□□ -2.04
Copb1Q9JIF7 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Copb1Q9JIF7 Gm16355-201ENSMUST00000128606 231 ntBASIC2.32□□□□□ -2.04
Copb1Q9JIF7 Gm25488-201ENSMUST00000158728 118 ntBASIC2.32□□□□□ -2.04
Copb1Q9JIF7 Gm17161-201ENSMUST00000169187 524 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms