Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm25381-201ENSMUST00000102078 109 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm22554-201ENSMUST00000157798 147 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm22731-201ENSMUST00000158086 94 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm26157-201ENSMUST00000158974 126 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm24390-201ENSMUST00000179578 62 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Mir6905-201ENSMUST00000184228 70 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Mir7009-201ENSMUST00000184519 64 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm37557-201ENSMUST00000191640 139 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm26379-202ENSMUST00000200225 132 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm10092-201ENSMUST00000077110 180 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.24□□□□□ -2.05
Trim54Q9ERP3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Gm12512-201ENSMUST00000119620 217 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Gm23977-201ENSMUST00000177871 74 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Gm29140-201ENSMUST00000190187 476 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trim54Q9ERP3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm24423-201ENSMUST00000101982 106 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm23492-201ENSMUST00000116837 115 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm23109-201ENSMUST00000116867 126 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm26287-201ENSMUST00000158887 81 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm17052-201ENSMUST00000165496 289 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm3724-201ENSMUST00000197957 349 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm11351-202ENSMUST00000225724 478 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm25788-201ENSMUST00000082721 131 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm26493-201ENSMUST00000083155 136 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.22□□□□□ -2.05
Trim54Q9ERP3 Mir767-201ENSMUST00000103256 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm25377-201ENSMUST00000104334 129 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm14748-201ENSMUST00000119819 411 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.21□□□□□ -2.06
Trim54Q9ERP3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm22510-201ENSMUST00000179304 79 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm26336-201ENSMUST00000179449 79 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm26390-201ENSMUST00000179628 79 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm22450-201ENSMUST00000179641 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm25473-201ENSMUST00000180191 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm27545-201ENSMUST00000184755 202 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.21□□□□□ -2.06
Trim54Q9ERP3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm24856-201ENSMUST00000082809 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm24044-201ENSMUST00000083107 156 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm26495-201ENSMUST00000083152 137 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm26071-201ENSMUST00000083261 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm24521-201ENSMUST00000083958 107 ntBASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trim54Q9ERP3 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm25664-201ENSMUST00000157697 107 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm22338-201ENSMUST00000157715 129 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm25491-201ENSMUST00000158733 308 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm17161-201ENSMUST00000169187 524 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm42960-201ENSMUST00000202160 241 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Mir93-201ENSMUST00000083593 88 ntBASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Trim54Q9ERP3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Mir758-201ENSMUST00000103260 81 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm22935-201ENSMUST00000103960 104 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm24283-201ENSMUST00000104233 107 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm22675-201ENSMUST00000158430 104 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm25836-201ENSMUST00000158918 123 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm25024-201ENSMUST00000179667 104 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Mir6540-201ENSMUST00000184886 108 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm29604-201ENSMUST00000187176 163 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm45365-201ENSMUST00000209489 256 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Gm24204-201ENSMUST00000082950 107 ntBASIC2.19□□□□□ -2.06
Trim54Q9ERP3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Gm23090-201ENSMUST00000177331 78 ntBASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Mir300-201ENSMUST00000083485 79 ntBASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Gm23039-201ENSMUST00000083870 161 ntBASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trim54Q9ERP3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms