Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37918-201ENSMUST00000192071 120 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm43602-201ENSMUST00000196772 300 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm8125-201ENSMUST00000216602 738 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm20102-201ENSMUST00000222445 220 ntBASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Lima1Q9ERG0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm26082-201ENSMUST00000104070 127 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm25506-201ENSMUST00000104339 70 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm13341-201ENSMUST00000120780 672 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm20630-201ENSMUST00000177387 551 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm44726-201ENSMUST00000203427 217 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.76□□□□□ -2.29
Lima1Q9ERG0 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.76□□□□□ -2.29
Lima1Q9ERG0 Gm22656-201ENSMUST00000104199 171 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm23836-201ENSMUST00000104434 129 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm14296-202ENSMUST00000108931 750 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm22477-201ENSMUST00000122569 316 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm24618-201ENSMUST00000177718 94 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm23953-201ENSMUST00000178214 94 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm26332-201ENSMUST00000179813 94 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm22863-201ENSMUST00000180265 94 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm27420-201ENSMUST00000183823 79 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Mir6240-201ENSMUST00000184281 117 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm28343-201ENSMUST00000185386 112 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm20257-202ENSMUST00000188643 130 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm38113-201ENSMUST00000193704 201 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm37801-201ENSMUST00000194754 274 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm20144-201ENSMUST00000203031 165 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm23097-201ENSMUST00000083448 105 ntBASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
Lima1Q9ERG0 Gm11792-201ENSMUST00000120640 168 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm23169-201ENSMUST00000157157 112 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm23106-201ENSMUST00000157554 101 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm25884-201ENSMUST00000157782 62 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm20386-201ENSMUST00000174010 132 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Mir5104-201ENSMUST00000175319 94 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm24799-201ENSMUST00000178431 79 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm26200-201ENSMUST00000180273 79 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm9227-201ENSMUST00000194733 566 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm42855-201ENSMUST00000197388 253 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm44010-201ENSMUST00000204432 331 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm24150-201ENSMUST00000082759 104 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm24261-201ENSMUST00000083744 104 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Gm23041-201ENSMUST00000083868 106 ntBASIC0.74□□□□□ -2.29
Lima1Q9ERG0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm12143-201ENSMUST00000119666 332 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm15899-201ENSMUST00000128586 238 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm26652-202ENSMUST00000181672 475 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm42719-201ENSMUST00000197393 355 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm18188-201ENSMUST00000219386 478 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm24038-201ENSMUST00000082872 159 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Mir410-201ENSMUST00000083563 81 ntBASIC0.73□□□□□ -2.29
Lima1Q9ERG0 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm22279-201ENSMUST00000157200 93 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm25434-201ENSMUST00000158278 167 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm25011-201ENSMUST00000158398 126 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm22403-201ENSMUST00000174919 84 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm36953-201ENSMUST00000195295 268 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm10264-201ENSMUST00000220589 429 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm23735-201ENSMUST00000082551 134 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm24624-201ENSMUST00000082617 164 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm24152-201ENSMUST00000082764 163 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm24355-201ENSMUST00000082858 122 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm24035-201ENSMUST00000082867 107 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm25789-201ENSMUST00000083294 76 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.72□□□□□ -2.29
Lima1Q9ERG0 Gm24579-201ENSMUST00000103964 144 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm22113-201ENSMUST00000158343 104 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm27974-201ENSMUST00000183415 105 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Mir7052-201ENSMUST00000184821 65 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm28992-201ENSMUST00000190534 139 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.71□□□□□ -2.3
Lima1Q9ERG0 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm9795-201ENSMUST00000062156 693 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm22306-201ENSMUST00000082692 107 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm25579-201ENSMUST00000083407 106 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Mir155-201ENSMUST00000083463 65 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm26164-201ENSMUST00000083793 104 ntBASIC0.71□□□□□ -2.3
Lima1Q9ERG0 Gm11522-201ENSMUST00000120533 176 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms