Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm25541-201ENSMUST00000116888 126 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Gm22075-201ENSMUST00000158599 192 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Gm25486-201ENSMUST00000158726 63 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Gm16038-201ENSMUST00000159317 193 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Mir3057-201ENSMUST00000175040 91 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Gm26056-201ENSMUST00000083043 104 ntBASIC1.49□□□□□ -2.17
Scn4aQ9ER60 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm15861-201ENSMUST00000120979 339 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm23854-201ENSMUST00000158378 108 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm24487-201ENSMUST00000178017 63 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.48□□□□□ -2.17
Scn4aQ9ER60 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm43578-201ENSMUST00000201250 459 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm44655-201ENSMUST00000207768 423 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.48□□□□□ -2.17
Scn4aQ9ER60 Gm11572-201ENSMUST00000119164 120 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm27793-201ENSMUST00000183405 76 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm27410-201ENSMUST00000183851 115 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm18357-201ENSMUST00000188184 580 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.47□□□□□ -2.17
Scn4aQ9ER60 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm22021-201ENSMUST00000104353 107 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm12417-201ENSMUST00000119153 403 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm11359-201ENSMUST00000120039 567 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm22281-201ENSMUST00000157198 103 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Snord13-201ENSMUST00000157627 104 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm23921-201ENSMUST00000175258 107 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm43220-201ENSMUST00000199299 282 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Gm45907-201ENSMUST00000213023 193 ntBASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Scn4aQ9ER60 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn4aQ9ER60 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm23013-201ENSMUST00000104146 106 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm23355-201ENSMUST00000177614 107 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm24308-201ENSMUST00000177773 114 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm9156-201ENSMUST00000189660 463 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm36946-201ENSMUST00000192706 435 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Gm37399-201ENSMUST00000195224 416 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.46□□□□□ -2.18
Scn4aQ9ER60 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.46□□□□□ -2.18
Scn4aQ9ER60 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm25543-201ENSMUST00000122678 312 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Mir7241-201ENSMUST00000184532 64 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm26265-202ENSMUST00000196326 133 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm43993-201ENSMUST00000203972 247 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm45365-201ENSMUST00000209489 256 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm24536-201ENSMUST00000083144 107 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm15214-201ENSMUST00000122155 470 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm22027-201ENSMUST00000122737 127 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Scn4aQ9ER60 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm10360-201ENSMUST00000097219 272 ntBASIC1.45□□□□□ -2.18
Scn4aQ9ER60 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Gm16546-201ENSMUST00000159442 355 ntBASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Snord14a-201ENSMUST00000082807 87 ntBASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.44□□□□□ -2.18
Scn4aQ9ER60 Gm15067-201ENSMUST00000119534 156 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm14678-201ENSMUST00000121396 482 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm25658-201ENSMUST00000158472 128 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Cfap61-214ENSMUST00000167179 183 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm24810-201ENSMUST00000175317 70 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm44473-201ENSMUST00000204039 152 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm5010-201ENSMUST00000213131 260 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm22685-201ENSMUST00000082848 106 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm13967-201ENSMUST00000120404 380 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm24262-201ENSMUST00000157431 144 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Mir1936-201ENSMUST00000158699 93 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm28414-201ENSMUST00000190111 294 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm28211-201ENSMUST00000190920 315 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Gm44128-201ENSMUST00000204909 219 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms