Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26412-201ENSMUST00000157666 55 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Mir1951-201ENSMUST00000157981 89 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm24573-201ENSMUST00000175499 112 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm18486-201ENSMUST00000184040 298 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm45116-201ENSMUST00000207392 275 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 Gm44666-201ENSMUST00000208544 391 ntBASIC3.22□□□□□ -1.89
Upf1Q9EPU0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm22051-201ENSMUST00000117002 127 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm22553-201ENSMUST00000157797 295 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm23858-201ENSMUST00000158384 106 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm26022-201ENSMUST00000158663 108 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Mir3106-201ENSMUST00000175401 82 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm6060-201ENSMUST00000188671 251 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Upf1Q9EPU0 Gm6954-201ENSMUST00000117416 225 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm22221-201ENSMUST00000157362 103 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm23325-201ENSMUST00000157422 129 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm23101-201ENSMUST00000157550 137 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm24015-201ENSMUST00000157725 232 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm25267-201ENSMUST00000158522 63 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm24106-201ENSMUST00000175498 127 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm37428-201ENSMUST00000193886 137 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm44482-201ENSMUST00000199232 103 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.2□□□□□ -1.9
Upf1Q9EPU0 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm25124-201ENSMUST00000083345 164 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Mir340-201ENSMUST00000083483 98 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf1Q9EPU0 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm24670-201ENSMUST00000104154 132 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm23642-201ENSMUST00000157858 258 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Mir28b-201ENSMUST00000175399 80 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Mir669k-201ENSMUST00000177742 127 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm25673-201ENSMUST00000179957 127 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm6105-201ENSMUST00000200580 624 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm22704-201ENSMUST00000083027 137 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm24615-201ENSMUST00000083268 113 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.19□□□□□ -1.9
Upf1Q9EPU0 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm15272-201ENSMUST00000120865 233 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm23182-201ENSMUST00000158688 135 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm37579-201ENSMUST00000194291 142 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm34139-201ENSMUST00000196166 294 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Gm45456-201ENSMUST00000210841 243 ntBASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Upf1Q9EPU0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm11285-201ENSMUST00000118443 322 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm26105-201ENSMUST00000157253 190 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm26482-201ENSMUST00000158015 62 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm28344-201ENSMUST00000185704 279 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.17□□□□□ -1.9
Upf1Q9EPU0 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 AF357341-201ENSMUST00000083088 75 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm24762-201ENSMUST00000083689 104 ntBASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Upf1Q9EPU0 Gm23015-201ENSMUST00000104145 128 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm23990-201ENSMUST00000117031 117 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm13345-201ENSMUST00000121928 228 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm23716-201ENSMUST00000157348 144 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm22075-201ENSMUST00000158599 192 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm23714-201ENSMUST00000179259 105 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Mir6925-201ENSMUST00000197857 70 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Gm43991-201ENSMUST00000203751 274 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.16□□□□□ -1.9
Upf1Q9EPU0 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Upf1Q9EPU0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Upf1Q9EPU0 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.15□□□□□ -1.9
Upf1Q9EPU0 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.15□□□□□ -1.9
Upf1Q9EPU0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Upf1Q9EPU0 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm25599-201ENSMUST00000157816 103 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm23194-201ENSMUST00000158813 105 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm6788-201ENSMUST00000166459 270 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm24510-201ENSMUST00000174965 94 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm16404-201ENSMUST00000177739 468 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm14598-201ENSMUST00000180109 468 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm14625-201ENSMUST00000180231 468 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm28002-201ENSMUST00000184832 100 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms