Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25253-201ENSMUST00000179958 107 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm27656-201ENSMUST00000185055 80 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm42834-201ENSMUST00000196845 256 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm20144-201ENSMUST00000203031 165 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm23041-201ENSMUST00000083868 106 ntBASIC1.07□□□□□ -2.24
Cdc40Q9DC48 Gm13992-201ENSMUST00000120558 156 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm22281-201ENSMUST00000157198 103 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm22485-201ENSMUST00000157990 109 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm26401-201ENSMUST00000158502 76 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm24510-201ENSMUST00000174965 94 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm24618-201ENSMUST00000177718 94 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm23953-201ENSMUST00000178214 94 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm26332-201ENSMUST00000179813 94 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm22863-201ENSMUST00000180265 94 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Mir8119-201ENSMUST00000183371 129 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm27668-201ENSMUST00000184188 120 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm42855-201ENSMUST00000197388 253 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm43199-201ENSMUST00000200019 307 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm44010-201ENSMUST00000204432 331 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm33654-201ENSMUST00000221704 215 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Gm24252-201ENSMUST00000083700 132 ntBASIC1.06□□□□□ -2.24
Cdc40Q9DC48 Snord71-201ENSMUST00000104361 85 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm13967-201ENSMUST00000120404 380 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm11835-201ENSMUST00000120635 663 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm26363-201ENSMUST00000158866 83 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm17067-202ENSMUST00000180131 123 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm25284-201ENSMUST00000180345 141 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm27793-201ENSMUST00000183405 76 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm28992-201ENSMUST00000190534 139 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm38050-201ENSMUST00000191904 238 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm42622-201ENSMUST00000197229 355 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm43367-201ENSMUST00000199986 625 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Cdc40Q9DC48 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Cdc40Q9DC48 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm22003-201ENSMUST00000101885 107 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm12449-201ENSMUST00000117572 234 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm13729-201ENSMUST00000120328 406 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm23277-201ENSMUST00000157914 136 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm25976-201ENSMUST00000158695 130 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm25069-201ENSMUST00000175238 86 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm23410-201ENSMUST00000179967 107 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm22756-201ENSMUST00000180118 107 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm27410-201ENSMUST00000183851 115 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm29661-201ENSMUST00000186781 315 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm29308-201ENSMUST00000188863 315 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm37918-201ENSMUST00000192071 120 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm22306-201ENSMUST00000082692 107 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm22505-201ENSMUST00000082956 108 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm22363-201ENSMUST00000083100 108 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm23814-201ENSMUST00000083230 102 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm23095-201ENSMUST00000083446 107 ntBASIC1.04□□□□□ -2.24
Cdc40Q9DC48 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Gm11792-201ENSMUST00000120640 168 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Gm25805-201ENSMUST00000122788 108 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Cdc40Q9DC48 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Gm45878-201ENSMUST00000211839 241 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Gm25930-201ENSMUST00000082785 107 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Mir196b-201ENSMUST00000083509 85 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Cdc40Q9DC48 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.03□□□□□ -2.24
Cdc40Q9DC48 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Mir293-201ENSMUST00000104841 80 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Mir1904-201ENSMUST00000122702 80 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm24504-201ENSMUST00000157679 100 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm37089-201ENSMUST00000195616 129 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm43220-201ENSMUST00000199299 282 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm45119-201ENSMUST00000207612 199 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm19855-201ENSMUST00000210145 249 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm23721-201ENSMUST00000083005 107 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm26056-201ENSMUST00000083043 104 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Snord1a-201ENSMUST00000083160 74 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm24494-201ENSMUST00000083804 81 ntBASIC1.02□□□□□ -2.25
Cdc40Q9DC48 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm22935-201ENSMUST00000103960 104 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm22785-201ENSMUST00000104087 132 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms