Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24150-201ENSMUST00000082759 104 ntBASIC0.82□□□□□ -2.28
Ccdc3Q9D6Y1 Gm14803-201ENSMUST00000117163 361 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm13720-201ENSMUST00000120741 196 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24221-201ENSMUST00000158833 313 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm2962-201ENSMUST00000159266 336 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26430-201ENSMUST00000178054 107 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25121-201ENSMUST00000179846 79 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24020-201ENSMUST00000180156 108 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm27640-201ENSMUST00000184580 147 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28597-201ENSMUST00000187664 666 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm9227-201ENSMUST00000194733 566 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm5034-201ENSMUST00000199115 634 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm11351-202ENSMUST00000225724 478 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26224-201ENSMUST00000082506 80 ntBASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Ccdc3Q9D6Y1 Gm13341-201ENSMUST00000120780 672 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm23435-201ENSMUST00000157183 156 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24808-201ENSMUST00000157993 118 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm23016-201ENSMUST00000158431 62 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Mir1936-201ENSMUST00000158699 93 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm19855-201ENSMUST00000210145 249 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm18696-201ENSMUST00000220103 274 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm24920-201ENSMUST00000083018 85 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.8□□□□□ -2.28
Ccdc3Q9D6Y1 Gm11512-201ENSMUST00000119669 663 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Mir3061-201ENSMUST00000175129 91 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Mir7j-201ENSMUST00000184427 122 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28343-201ENSMUST00000185386 112 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28414-201ENSMUST00000190111 294 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm20102-201ENSMUST00000222445 220 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.79□□□□□ -2.28
Ccdc3Q9D6Y1 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm14392-201ENSMUST00000120332 401 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm13577-201ENSMUST00000121365 205 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm14413-201ENSMUST00000122158 408 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26335-201ENSMUST00000178449 107 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25314-201ENSMUST00000178810 79 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm26180-201ENSMUST00000179942 107 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28862-201ENSMUST00000188246 163 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm28506-201ENSMUST00000189937 150 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm37128-201ENSMUST00000192599 232 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Gm25579-201ENSMUST00000083407 106 ntBASIC0.78□□□□□ -2.28
Ccdc3Q9D6Y1 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm14296-202ENSMUST00000108931 750 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22477-201ENSMUST00000122569 316 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm25663-201ENSMUST00000157698 135 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22841-201ENSMUST00000158443 62 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24085-201ENSMUST00000175172 116 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24308-201ENSMUST00000177773 114 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24625-201ENSMUST00000082622 130 ntBASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Ccdc3Q9D6Y1 Mir701-201ENSMUST00000102208 109 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23836-201ENSMUST00000104434 129 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm25787-201ENSMUST00000104709 92 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm11572-201ENSMUST00000119164 120 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm14269-201ENSMUST00000120455 306 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm17148-201ENSMUST00000164702 249 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Mir3109-201ENSMUST00000175301 88 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Mir5104-201ENSMUST00000175319 94 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm20257-202ENSMUST00000188643 130 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm37399-201ENSMUST00000195224 416 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm43250-201ENSMUST00000196536 273 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm42855-201ENSMUST00000197388 253 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Snord68-201ENSMUST00000082516 86 ntBASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms