Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.31□□□□□ -1.88
Trim42Q9D2H5 Gm23136-201ENSMUST00000083425 99 ntBASIC3.31□□□□□ -1.88
Trim42Q9D2H5 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim42Q9D2H5 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm25169-201ENSMUST00000104190 129 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm22196-201ENSMUST00000116865 109 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm14567-201ENSMUST00000117155 174 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm26276-201ENSMUST00000157099 109 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm4479-201ENSMUST00000178807 171 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm27189-201ENSMUST00000184119 190 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Gm28002-201ENSMUST00000184832 100 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.3□□□□□ -1.88
Trim42Q9D2H5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Gm13588-201ENSMUST00000120026 135 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Gm24277-201ENSMUST00000158661 104 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Mir5710-201ENSMUST00000176884 69 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Gm8034-201ENSMUST00000178853 132 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Gm23247-201ENSMUST00000083373 107 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Gm22739-201ENSMUST00000083437 160 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Mir7-1-201ENSMUST00000083500 108 ntBASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim42Q9D2H5 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm26418-201ENSMUST00000104275 137 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm11414-201ENSMUST00000121795 263 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm23859-201ENSMUST00000158383 64 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm24837-201ENSMUST00000158683 81 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm27698-201ENSMUST00000184060 249 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim42Q9D2H5 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Trim42Q9D2H5 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Trim42Q9D2H5 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm23470-201ENSMUST00000157129 120 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm24946-201ENSMUST00000158332 106 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Mir8103-201ENSMUST00000183945 107 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm45429-201ENSMUST00000209527 172 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm25588-201ENSMUST00000082501 140 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm24099-201ENSMUST00000083384 107 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Mir132-201ENSMUST00000083603 66 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim42Q9D2H5 Mir547-201ENSMUST00000102051 78 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm22270-201ENSMUST00000104034 132 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm24468-201ENSMUST00000104489 104 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm11285-201ENSMUST00000118443 322 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm11471-201ENSMUST00000121824 198 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm15466-201ENSMUST00000122299 333 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm24745-201ENSMUST00000157840 85 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm22858-201ENSMUST00000174972 76 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm26498-201ENSMUST00000177799 79 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm23567-201ENSMUST00000178005 107 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm25633-201ENSMUST00000178565 107 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm26230-201ENSMUST00000180141 79 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm37239-201ENSMUST00000193510 141 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm44476-201ENSMUST00000196225 91 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm22805-201ENSMUST00000082739 107 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm25480-201ENSMUST00000083217 133 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm22354-201ENSMUST00000083919 70 ntBASIC3.26□□□□□ -1.89
Trim42Q9D2H5 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
Trim42Q9D2H5 Gm24119-201ENSMUST00000103979 246 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm12213-201ENSMUST00000119924 353 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm16533-201ENSMUST00000140035 228 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm22310-201ENSMUST00000157509 116 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm22079-201ENSMUST00000157592 106 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm25978-201ENSMUST00000158698 90 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm29658-201ENSMUST00000185404 230 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm28270-201ENSMUST00000188550 109 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm28328-201ENSMUST00000188869 109 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms