Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm23656-201ENSMUST00000122626 112 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm24629-201ENSMUST00000122762 89 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm24724-201ENSMUST00000158230 107 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm22434-201ENSMUST00000158549 122 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm22011-201ENSMUST00000158790 123 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm24656-201ENSMUST00000177548 132 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Gm27997-201ENSMUST00000184942 69 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Snora3-201ENSMUST00000083082 132 ntBASIC1.86□□□□□ -2.11
Vps28Q9D1C8 Mir223-201ENSMUST00000102112 110 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Mir293-201ENSMUST00000104841 80 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm14761-201ENSMUST00000121363 262 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm25914-201ENSMUST00000157618 153 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm24501-201ENSMUST00000158452 62 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Mir6419-201ENSMUST00000184784 113 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm37801-201ENSMUST00000194754 274 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm45654-201ENSMUST00000210980 123 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm25930-201ENSMUST00000082785 107 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm23845-201ENSMUST00000083834 152 ntBASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Vps28Q9D1C8 Gm23048-201ENSMUST00000157237 129 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm24668-201ENSMUST00000158935 104 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm7958-201ENSMUST00000178255 468 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm7950-201ENSMUST00000179633 468 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Mir6352-201ENSMUST00000184495 116 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Mir376a-201ENSMUST00000197584 68 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm23370-201ENSMUST00000199545 130 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm5010-201ENSMUST00000213131 260 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm22723-201ENSMUST00000083820 129 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Gm26107-201ENSMUST00000083972 107 ntBASIC1.84□□□□□ -2.11
Vps28Q9D1C8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm12512-201ENSMUST00000119620 217 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm11606-201ENSMUST00000120706 617 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm6025-201ENSMUST00000121517 201 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm24277-201ENSMUST00000158661 104 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Mir3057-201ENSMUST00000175040 91 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Mir7679-201ENSMUST00000183379 63 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm29308-201ENSMUST00000188863 315 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm37693-201ENSMUST00000194562 234 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm44384-201ENSMUST00000200208 114 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm45673-201ENSMUST00000210293 358 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm26922-201ENSMUST00000082687 72 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm25357-201ENSMUST00000082745 72 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm24164-201ENSMUST00000093663 104 ntBASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Vps28Q9D1C8 Gm23010-201ENSMUST00000104151 126 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Gm26024-201ENSMUST00000158657 322 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Gm28453-203ENSMUST00000187041 189 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Gm37778-201ENSMUST00000191732 190 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Gm37579-201ENSMUST00000194291 142 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Gm24966-201ENSMUST00000082443 79 ntBASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Vps28Q9D1C8 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Gm15002-201ENSMUST00000118406 452 ntBASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Gm28849-201ENSMUST00000188127 174 ntBASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Gm28330-201ENSMUST00000190353 171 ntBASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Mir465d-201ENSMUST00000196314 58 ntBASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.81□□□□□ -2.12
Vps28Q9D1C8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm23670-201ENSMUST00000157469 119 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm24394-201ENSMUST00000158141 123 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm22242-201ENSMUST00000175224 118 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm27517-201ENSMUST00000184347 236 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm28579-201ENSMUST00000186143 369 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.8□□□□□ -2.12
Vps28Q9D1C8 Gm26135-201ENSMUST00000101993 72 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Gm13725-201ENSMUST00000122139 207 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Snord50b-201ENSMUST00000178497 72 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Mir7227-201ENSMUST00000200408 59 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Gm29818-201ENSMUST00000218070 165 ntBASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Vps28Q9D1C8 Mir767-201ENSMUST00000103256 107 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms