Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm25471-201ENSMUST00000180126 94 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.45□□□□□ -2.02
Ddx56Q9D0R4 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Gm24385-201ENSMUST00000122694 350 ntBASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Mir1951-201ENSMUST00000157981 89 ntBASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Gm24816-201ENSMUST00000175311 151 ntBASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Gm28900-201ENSMUST00000185232 156 ntBASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.44□□□□□ -2.02
Ddx56Q9D0R4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm25315-201ENSMUST00000116823 121 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm15861-201ENSMUST00000120979 339 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm23642-201ENSMUST00000157858 258 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm23548-201ENSMUST00000158963 106 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm16561-201ENSMUST00000163001 192 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm21885-201ENSMUST00000178891 327 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Mir6336-201ENSMUST00000183581 130 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Gm23423-201ENSMUST00000082782 106 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Rny1-201ENSMUST00000083767 112 ntBASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ddx56Q9D0R4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Gm24937-201ENSMUST00000122597 134 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Gm26214-201ENSMUST00000158581 107 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Gm23181-201ENSMUST00000158685 110 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Gm23977-201ENSMUST00000177871 74 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Gm29308-201ENSMUST00000188863 315 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Ddx56Q9D0R4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm26280-201ENSMUST00000157096 101 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm25910-201ENSMUST00000157620 140 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm24075-201ENSMUST00000158175 72 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm26022-201ENSMUST00000158663 108 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm23194-201ENSMUST00000158813 105 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Snord87-201ENSMUST00000175437 87 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm28912-201ENSMUST00000189001 234 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm29657-201ENSMUST00000189807 342 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm22421-201ENSMUST00000083058 107 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm24453-201ENSMUST00000083346 76 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.41□□□□□ -2.02
Ddx56Q9D0R4 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Ddx56Q9D0R4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm12797-201ENSMUST00000118645 273 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm23889-201ENSMUST00000122689 104 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm22675-201ENSMUST00000158430 104 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm17113-201ENSMUST00000170118 171 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm37693-201ENSMUST00000194562 234 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Mir3069-201ENSMUST00000198802 65 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm24313-201ENSMUST00000082561 133 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm24661-201ENSMUST00000083205 104 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm25513-201ENSMUST00000083861 162 ntBASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Ddx56Q9D0R4 Gm25168-201ENSMUST00000104189 132 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Snora15-201ENSMUST00000177461 131 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm23571-201ENSMUST00000180073 127 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Mir7683-201ENSMUST00000183842 61 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm29014-201ENSMUST00000191422 326 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm25402-201ENSMUST00000082966 131 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Gm24042-201ENSMUST00000083114 103 ntBASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ddx56Q9D0R4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Gm15162-201ENSMUST00000119325 283 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Mir3075-201ENSMUST00000175340 85 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Gm23002-201ENSMUST00000179221 107 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Gm5900-201ENSMUST00000179862 375 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Mir6925-201ENSMUST00000197857 70 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Gm5010-201ENSMUST00000213131 260 ntBASIC2.38□□□□□ -2.03
Ddx56Q9D0R4 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm24274-201ENSMUST00000116787 124 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm14937-201ENSMUST00000119709 208 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms