Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26200-201ENSMUST00000180273 79 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Snord14a-201ENSMUST00000082807 87 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.61□□□□□ -2.15
Smc1aQ9CU62 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm22021-201ENSMUST00000104353 107 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm23336-201ENSMUST00000117023 123 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm25805-201ENSMUST00000122788 108 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm23122-201ENSMUST00000157645 103 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm23221-201ENSMUST00000158118 93 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm25253-201ENSMUST00000179958 107 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm28200-201ENSMUST00000187778 315 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm29378-201ENSMUST00000188723 315 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm28909-201ENSMUST00000189406 315 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm24356-201ENSMUST00000082859 106 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Mir32-201ENSMUST00000083610 70 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm26329-201ENSMUST00000093723 110 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.6□□□□□ -2.15
Smc1aQ9CU62 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm14307-201ENSMUST00000118930 291 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm11862-201ENSMUST00000119678 659 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm26255-201ENSMUST00000122492 103 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm14297-201ENSMUST00000129110 291 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm16362-201ENSMUST00000135189 214 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm16358-201ENSMUST00000146046 210 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm22228-201ENSMUST00000157364 101 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm25423-201ENSMUST00000157609 107 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm23558-201ENSMUST00000157823 80 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm23779-201ENSMUST00000157938 64 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm24737-201ENSMUST00000158861 100 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm22862-201ENSMUST00000178593 121 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm17067-202ENSMUST00000180131 123 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm29037-201ENSMUST00000189092 313 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm28288-201ENSMUST00000191019 214 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm28408-201ENSMUST00000191557 463 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Mir7661-201ENSMUST00000197023 61 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.59□□□□□ -2.15
Smc1aQ9CU62 Gm10092-201ENSMUST00000077110 180 ntBASIC1.59□□□□□ -2.15
Smc1aQ9CU62 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm13992-201ENSMUST00000120558 156 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm25318-201ENSMUST00000122554 314 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm24632-201ENSMUST00000122770 323 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm26049-201ENSMUST00000157313 108 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Mir1936-201ENSMUST00000158699 93 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm23921-201ENSMUST00000175258 107 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Mir3968-201ENSMUST00000175355 100 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm27271-201ENSMUST00000183509 170 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Mir6240-201ENSMUST00000184281 117 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm35736-201ENSMUST00000203681 313 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm45207-201ENSMUST00000207469 145 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Gm45456-201ENSMUST00000210841 243 ntBASIC1.58□□□□□ -2.16
Smc1aQ9CU62 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Smc1aQ9CU62 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm23907-201ENSMUST00000104595 189 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm24275-201ENSMUST00000116780 146 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm11834-201ENSMUST00000122257 585 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm23390-201ENSMUST00000157393 106 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm23208-201ENSMUST00000158666 127 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm23024-201ENSMUST00000158770 292 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm26435-201ENSMUST00000179026 107 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm43250-201ENSMUST00000196536 273 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm23370-201ENSMUST00000199545 130 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm24765-201ENSMUST00000083691 103 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.57□□□□□ -2.16
Smc1aQ9CU62 Gm25495-201ENSMUST00000104431 131 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm22598-201ENSMUST00000157600 127 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Snord13-201ENSMUST00000157627 104 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm37313-201ENSMUST00000191673 290 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm44491-201ENSMUST00000196794 96 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm20144-201ENSMUST00000203031 165 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm44419-201ENSMUST00000203338 229 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm5899-201ENSMUST00000071770 270 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm23625-201ENSMUST00000082457 100 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Gm23412-201ENSMUST00000083017 107 ntBASIC1.56□□□□□ -2.16
Smc1aQ9CU62 Mir759-201ENSMUST00000103254 98 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm25759-201ENSMUST00000103988 129 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm8121-201ENSMUST00000153583 499 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm23262-201ENSMUST00000158323 168 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Mir3098-201ENSMUST00000175416 87 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm37713-201ENSMUST00000191746 198 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm37338-201ENSMUST00000191986 127 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm44063-201ENSMUST00000203307 376 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 161.6 ms