Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 Gm24163-201ENSMUST00000093660 132 ntBASIC0.83□□□□□ -2.28
RTRAFQ9CQE8 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm14923-201ENSMUST00000118270 155 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm25884-201ENSMUST00000157782 62 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm25707-201ENSMUST00000175120 96 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Mir6406-201ENSMUST00000183592 120 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm10105-201ENSMUST00000184601 270 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm45296-201ENSMUST00000209625 205 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Snora41-201ENSMUST00000082668 132 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm22306-201ENSMUST00000082692 107 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm23299-201ENSMUST00000082708 79 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm25930-201ENSMUST00000082785 107 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Mir155-201ENSMUST00000083463 65 ntBASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
RTRAFQ9CQE8 Gm22785-201ENSMUST00000104087 132 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Gm24504-201ENSMUST00000157679 100 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Gm24902-201ENSMUST00000158126 123 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Gm27419-201ENSMUST00000184576 109 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Gm24038-201ENSMUST00000082872 159 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Mir32-201ENSMUST00000083610 70 ntBASIC0.81□□□□□ -2.28
RTRAFQ9CQE8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm25376-201ENSMUST00000104340 133 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm23232-201ENSMUST00000157300 105 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm24808-201ENSMUST00000157993 118 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm24498-201ENSMUST00000158445 102 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Mir5104-201ENSMUST00000175319 94 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm22929-201ENSMUST00000175517 107 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Mir6380-201ENSMUST00000184334 81 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm44325-201ENSMUST00000196757 77 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm42719-201ENSMUST00000197393 355 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm5023-201ENSMUST00000217442 587 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm24966-201ENSMUST00000082443 79 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Mir496a-201ENSMUST00000093627 79 ntBASIC0.8□□□□□ -2.28
RTRAFQ9CQE8 Gm24588-201ENSMUST00000116696 83 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm14574-201ENSMUST00000120644 279 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm22477-201ENSMUST00000122569 316 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm16358-201ENSMUST00000146046 210 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm25663-201ENSMUST00000157698 135 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm22403-201ENSMUST00000174919 84 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm7958-201ENSMUST00000178255 468 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm7950-201ENSMUST00000179633 468 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Mir7063-201ENSMUST00000184158 91 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm27640-201ENSMUST00000184580 147 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm28489-201ENSMUST00000186655 316 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm28408-201ENSMUST00000191557 463 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm37579-201ENSMUST00000194291 142 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm37399-201ENSMUST00000195224 416 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Mir7661-201ENSMUST00000197023 61 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm24261-201ENSMUST00000083744 104 ntBASIC0.79□□□□□ -2.28
RTRAFQ9CQE8 Gm22545-201ENSMUST00000104350 132 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm23705-201ENSMUST00000104370 130 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm14922-201ENSMUST00000121131 163 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm23106-201ENSMUST00000157554 101 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Mir3061-201ENSMUST00000175129 91 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm23419-201ENSMUST00000175523 84 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Mir7017-201ENSMUST00000184894 62 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm43250-201ENSMUST00000196536 273 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm23625-201ENSMUST00000082457 100 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm26224-201ENSMUST00000082506 80 ntBASIC0.78□□□□□ -2.28
RTRAFQ9CQE8 Gm23013-201ENSMUST00000104146 106 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Gm23336-201ENSMUST00000117023 123 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Gm13518-201ENSMUST00000120018 233 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Gm23083-201ENSMUST00000157851 116 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Rny3-201ENSMUST00000083011 102 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms