Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.81□□□□□ -2.28
Use1Q9CQ56 Mir155-201ENSMUST00000083463 65 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.81□□□□□ -2.28
Use1Q9CQ56 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm22689-201ENSMUST00000102452 110 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm22545-201ENSMUST00000104350 132 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm14296-202ENSMUST00000108931 750 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm23169-201ENSMUST00000157157 112 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm25559-201ENSMUST00000157182 74 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm22515-201ENSMUST00000158273 305 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm20386-201ENSMUST00000174010 132 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Mir7062-201ENSMUST00000185038 66 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm27587-201ENSMUST00000185116 163 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm28597-201ENSMUST00000187664 666 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm44960-201ENSMUST00000207403 141 ntBASIC0.8□□□□□ -2.28
Use1Q9CQ56 Gm26500-201ENSMUST00000101867 106 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm14392-201ENSMUST00000120332 401 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm11334-201ENSMUST00000121969 156 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm14413-201ENSMUST00000122158 408 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm26968-201ENSMUST00000182894 481 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm27974-201ENSMUST00000183415 105 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm44358-201ENSMUST00000196301 98 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm45402-201ENSMUST00000211796 223 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.79□□□□□ -2.28
Use1Q9CQ56 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm24355-201ENSMUST00000082858 122 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm23097-201ENSMUST00000083448 105 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm25650-201ENSMUST00000083784 162 ntBASIC0.79□□□□□ -2.28
Use1Q9CQ56 Gm22750-201ENSMUST00000102076 103 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm3788-201ENSMUST00000119949 136 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Use1Q9CQ56 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm25314-201ENSMUST00000178810 79 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm38113-201ENSMUST00000193704 201 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm43220-201ENSMUST00000199299 282 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Mir3087-201ENSMUST00000199405 56 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm44726-201ENSMUST00000203427 217 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Gm10264-201ENSMUST00000220589 429 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.78□□□□□ -2.28
Use1Q9CQ56 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Use1Q9CQ56 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm23011-201ENSMUST00000104148 132 ntBASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm25805-201ENSMUST00000122788 108 ntBASIC0.77□□□□□ -2.29
Use1Q9CQ56 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm16358-201ENSMUST00000146046 210 ntBASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm27326-201ENSMUST00000183504 95 ntBASIC0.77□□□□□ -2.29
Use1Q9CQ56 Mir7665-201ENSMUST00000184907 63 ntBASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Use1Q9CQ56 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm24942-201ENSMUST00000158328 114 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm28862-201ENSMUST00000188246 163 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.76□□□□□ -2.29
Use1Q9CQ56 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm22884-201ENSMUST00000083127 140 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm25578-201ENSMUST00000083406 104 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Mir27b-201ENSMUST00000083541 73 ntBASIC0.76□□□□□ -2.29
Use1Q9CQ56 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.76□□□□□ -2.29
Use1Q9CQ56 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm24271-201ENSMUST00000102327 111 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm23013-201ENSMUST00000104146 106 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm11386-201ENSMUST00000117761 347 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm24401-201ENSMUST00000157868 91 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm26004-201ENSMUST00000158804 116 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm25166-201ENSMUST00000158909 111 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm28408-201ENSMUST00000191557 463 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm44325-201ENSMUST00000196757 77 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm44326-201ENSMUST00000198226 101 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm44396-201ENSMUST00000199843 114 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.75□□□□□ -2.29
Use1Q9CQ56 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Use1Q9CQ56 Gm25052-201ENSMUST00000122661 158 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm22447-201ENSMUST00000158155 92 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm20462-201ENSMUST00000172623 408 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm23967-201ENSMUST00000175062 78 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm25750-201ENSMUST00000175483 112 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm22802-201ENSMUST00000175621 89 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm23267-201ENSMUST00000178490 132 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm44320-201ENSMUST00000199276 86 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm45119-201ENSMUST00000207612 199 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.74□□□□□ -2.29
Use1Q9CQ56 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm33654-201ENSMUST00000221704 215 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.74□□□□□ -2.29
Use1Q9CQ56 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Use1Q9CQ56 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Use1Q9CQ56 Gm11794-201ENSMUST00000119446 237 ntBASIC0.73□□□□□ -2.29
Use1Q9CQ56 Gm25544-201ENSMUST00000122676 120 ntBASIC0.73□□□□□ -2.29
Use1Q9CQ56 Gm26393-201ENSMUST00000157625 129 ntBASIC0.73□□□□□ -2.29
Use1Q9CQ56 Gm22435-201ENSMUST00000158552 128 ntBASIC0.73□□□□□ -2.29
Use1Q9CQ56 Gm24154-201ENSMUST00000175261 130 ntBASIC0.73□□□□□ -2.29
Use1Q9CQ56 Gm24487-201ENSMUST00000178017 63 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms