| Hint3 | Q9CPS6 | Mir5624-201 | ENSMUST00000176635 | 61 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Obox4-ps37-201 | ENSMUST00000177223 | 276 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Mir6379-201 | ENSMUST00000183392 | 115 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Mir7225-201 | ENSMUST00000184178 | 54 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm29147-201 | ENSMUST00000186846 | 315 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm29227-201 | ENSMUST00000187139 | 315 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm29034-201 | ENSMUST00000188099 | 315 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm28160-201 | ENSMUST00000191229 | 315 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm37129-201 | ENSMUST00000195791 | 315 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Vmn1r-ps13-201 | ENSMUST00000204697 | 134 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm26107-201 | ENSMUST00000083972 | 107 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | AC154515.1-201 | ENSMUST00000226085 | 2841 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm26624-201 | ENSMUST00000181486 | 3769 nt | TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm14709-201 | ENSMUST00000121225 | 304 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm16162-201 | ENSMUST00000162296 | 297 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm29665-201 | ENSMUST00000191457 | 528 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Mir376a-201 | ENSMUST00000197584 | 68 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Mir3535-201 | ENSMUST00000197651 | 147 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Klk1b28-ps-201 | ENSMUST00000206374 | 217 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm45673-201 | ENSMUST00000210293 | 358 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | AC129202.1-201 | ENSMUST00000224895 | 526 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm25636-201 | ENSMUST00000082666 | 133 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm25930-201 | ENSMUST00000082785 | 107 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Gm23845-201 | ENSMUST00000083834 | 152 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Olfr1013-202 | ENSMUST00000216397 | 4925 nt | APPRIS P1 TSL 2 BASIC | 1.66 | □□□□□ -2.14 | | |
| Hint3 | Q9CPS6 | Mir669o-201 | ENSMUST00000103898 | 96 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm22935-201 | ENSMUST00000103960 | 104 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm25279-201 | ENSMUST00000122608 | 133 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | 1700120G11Rik-201 | ENSMUST00000150273 | 491 nt | TSL 1 (best) BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm16405-201 | ENSMUST00000169247 | 468 nt | APPRIS P1 TSL 3 BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm22242-201 | ENSMUST00000175224 | 118 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm24572-201 | ENSMUST00000175505 | 88 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm7958-201 | ENSMUST00000178255 | 468 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm7950-201 | ENSMUST00000179633 | 468 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm27997-201 | ENSMUST00000184942 | 69 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm28579-201 | ENSMUST00000186143 | 369 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm29657-201 | ENSMUST00000189807 | 342 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm37763-201 | ENSMUST00000193445 | 120 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm45543-201 | ENSMUST00000209327 | 88 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Olfr1064-ps1-201 | ENSMUST00000213670 | 600 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC163033.1-201 | ENSMUST00000218608 | 157 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC127371.3-201 | ENSMUST00000228129 | 415 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm24805-201 | ENSMUST00000082931 | 104 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | G2e3-203 | ENSMUST00000121521 | 2594 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Vmn2r69-201 | ENSMUST00000171213 | 2553 nt | APPRIS P1 TSL 5 BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Olfr1225-203 | ENSMUST00000217054 | 5517 nt | APPRIS P1 TSL 5 BASIC | 1.65 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23987-201 | ENSMUST00000117039 | 129 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm25333-201 | ENSMUST00000158035 | 246 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm24501-201 | ENSMUST00000158452 | 62 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm25730-201 | ENSMUST00000178753 | 165 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm43427-201 | ENSMUST00000198188 | 331 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | 4930598N05Rik-207 | ENSMUST00000208997 | 83 nt | TSL 5 BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC168056.1-201 | ENSMUST00000225270 | 180 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Trgj3-201 | ENSMUST00000103562 | 60 nt | APPRIS P1 BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm13714-201 | ENSMUST00000117313 | 221 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm22027-201 | ENSMUST00000122737 | 127 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Nell1os-202 | ENSMUST00000136672 | 491 nt | TSL 5 BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm15611-201 | ENSMUST00000146928 | 406 nt | TSL 1 (best) BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23390-201 | ENSMUST00000157393 | 106 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm22665-201 | ENSMUST00000158720 | 275 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm37801-201 | ENSMUST00000194754 | 274 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Olfr1070-ps1-201 | ENSMUST00000215939 | 388 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC160863.1-201 | ENSMUST00000218412 | 317 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23345-201 | ENSMUST00000083817 | 150 nt | BASIC | 1.63 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Vmn1r75-203 | ENSMUST00000226855 | 6548 nt | APPRIS P2 BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm36669-201 | ENSMUST00000201757 | 3650 nt | TSL 1 (best) BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm22761-201 | ENSMUST00000102278 | 96 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm14674-201 | ENSMUST00000117816 | 342 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm15002-201 | ENSMUST00000118406 | 452 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm14937-201 | ENSMUST00000119709 | 208 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Defb44-ps-201 | ENSMUST00000126871 | 219 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23289-201 | ENSMUST00000175615 | 108 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm27421-201 | ENSMUST00000184729 | 167 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm28434-201 | ENSMUST00000187738 | 500 nt | APPRIS P1 TSL 5 BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC117232.1-201 | ENSMUST00000197964 | 119 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Snora3-201 | ENSMUST00000083082 | 132 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23100-201 | ENSMUST00000083455 | 141 nt | BASIC | 1.62 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Olfr1450-202 | ENSMUST00000213587 | 2872 nt | APPRIS P1 TSL 5 BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Slco6c1-201 | ENSMUST00000027569 | 2747 nt | APPRIS P2 TSL 1 (best) BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Vmn1r29-202 | ENSMUST00000226971 | 4714 nt | APPRIS P1 BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm11794-201 | ENSMUST00000119446 | 237 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm12924-201 | ENSMUST00000121747 | 318 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm25914-201 | ENSMUST00000157618 | 153 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm24668-201 | ENSMUST00000158935 | 104 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm28453-203 | ENSMUST00000187041 | 189 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | 1700010N08Rik-201 | ENSMUST00000187456 | 189 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm23370-201 | ENSMUST00000199545 | 130 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm45754-201 | ENSMUST00000212380 | 279 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm5010-201 | ENSMUST00000213131 | 260 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC122428.1-201 | ENSMUST00000213709 | 217 nt | TSL 3 BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm29818-201 | ENSMUST00000218070 | 165 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC069074.1-201 | ENSMUST00000220048 | 381 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm31447-201 | ENSMUST00000222345 | 384 nt | TSL 3 BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC170600.1-201 | ENSMUST00000228763 | 277 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Gm25357-201 | ENSMUST00000082745 | 72 nt | BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Olfr821-203 | ENSMUST00000214177 | 1929 nt | APPRIS P1 TSL 5 BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Zfp600-201 | ENSMUST00000092750 | 4154 nt | APPRIS P1 TSL 1 (best) BASIC | 1.61 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | AC133934.2-201 | ENSMUST00000221729 | 4129 nt | BASIC | 1.6 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Traj52-201 | ENSMUST00000103691 | 66 nt | APPRIS P1 BASIC | 1.6 | □□□□□ -2.15 | | |
| Hint3 | Q9CPS6 | Mir669i-201 | ENSMUST00000117007 | 127 nt | BASIC | 1.6 | □□□□□ -2.15 | | |