Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm42834-201ENSMUST00000196845 256 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm43624-201ENSMUST00000197368 180 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm45207-201ENSMUST00000207469 145 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm26056-201ENSMUST00000083043 104 ntBASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Sf3b1Q99NB9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.31□□□□□ -2.2
Sf3b1Q99NB9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Sf3b1Q99NB9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.31□□□□□ -2.2
Sf3b1Q99NB9 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.31□□□□□ -2.2
Sf3b1Q99NB9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Sf3b1Q99NB9 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm13992-201ENSMUST00000120558 156 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm22791-201ENSMUST00000157232 145 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm23760-201ENSMUST00000158350 116 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Mir7675-201ENSMUST00000184262 58 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm44811-201ENSMUST00000209120 228 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm26493-201ENSMUST00000083155 136 ntBASIC1.3□□□□□ -2.2
Sf3b1Q99NB9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm23013-201ENSMUST00000104146 106 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm14782-201ENSMUST00000120151 195 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm25970-201ENSMUST00000157165 86 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Snord13-201ENSMUST00000157627 104 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm27317-201ENSMUST00000183533 95 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm10105-201ENSMUST00000184601 270 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm9251-201ENSMUST00000197202 628 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm19855-201ENSMUST00000210145 249 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm11351-202ENSMUST00000225724 478 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Mir211-201ENSMUST00000083651 106 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.29□□□□□ -2.2
Sf3b1Q99NB9 Gm23142-201ENSMUST00000101848 105 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm26240-201ENSMUST00000101893 105 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm23907-201ENSMUST00000104595 189 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm11359-201ENSMUST00000120039 567 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm37089-201ENSMUST00000195616 129 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm43238-201ENSMUST00000196463 359 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm24355-201ENSMUST00000082858 122 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.28□□□□□ -2.2
Sf3b1Q99NB9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm24499-201ENSMUST00000158446 104 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.27□□□□□ -2.21
Sf3b1Q99NB9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm15214-201ENSMUST00000122155 470 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Traj60-201ENSMUST00000167781 54 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm28992-201ENSMUST00000190534 139 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Mir32-201ENSMUST00000083610 70 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm22365-201ENSMUST00000093750 117 ntBASIC1.26□□□□□ -2.21
Sf3b1Q99NB9 Gm22673-201ENSMUST00000104415 131 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm23836-201ENSMUST00000104434 129 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm42606-201ENSMUST00000114209 239 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm25827-201ENSMUST00000157089 107 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm44149-201ENSMUST00000204256 226 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Sf3b1Q99NB9 Mir544-201ENSMUST00000103813 78 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm38050-201ENSMUST00000191904 238 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm37399-201ENSMUST00000195224 416 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm43220-201ENSMUST00000199299 282 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms