Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm11285-201ENSMUST00000118443 322 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm24595-201ENSMUST00000122501 110 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm26099-201ENSMUST00000157248 109 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Mir7242-201ENSMUST00000183710 79 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm23128-202ENSMUST00000196578 133 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm43991-201ENSMUST00000203751 274 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.89□□□□□ -1.95
Pcdha1Q91Y21 Gm14602-201ENSMUST00000118625 340 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm13560-201ENSMUST00000121865 329 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm23655-201ENSMUST00000122627 105 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm24443-201ENSMUST00000157242 132 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Mir3092-201ENSMUST00000174954 96 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm24510-201ENSMUST00000174965 94 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm28647-201ENSMUST00000188416 197 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm44478-201ENSMUST00000204875 114 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Gm22154-201ENSMUST00000083844 131 ntBASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Pcdha1Q91Y21 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Gm24122-201ENSMUST00000104107 132 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Mir1195-201ENSMUST00000116818 98 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Gm22557-201ENSMUST00000157804 102 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Gm20438-201ENSMUST00000174441 329 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Gm22699-201ENSMUST00000175376 105 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Mir21b-201ENSMUST00000184317 108 ntBASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Pcdha1Q91Y21 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Mir1966-201ENSMUST00000158807 108 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Gm24167-201ENSMUST00000177733 124 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Gm24028-201ENSMUST00000178991 124 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Gm23966-201ENSMUST00000179823 107 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.86□□□□□ -1.95
Pcdha1Q91Y21 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Mir344c-201ENSMUST00000103919 92 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm24263-201ENSMUST00000104059 107 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm22674-201ENSMUST00000104413 131 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm22148-201ENSMUST00000104445 107 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm9009-201ENSMUST00000117321 326 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm11414-201ENSMUST00000121795 263 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm22330-201ENSMUST00000158068 115 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm24676-201ENSMUST00000158758 75 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm16546-201ENSMUST00000159442 355 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm27851-201ENSMUST00000183529 63 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Gm44966-201ENSMUST00000208096 157 ntBASIC2.85□□□□□ -1.95
Pcdha1Q91Y21 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm25153-201ENSMUST00000157118 156 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm23665-201ENSMUST00000158054 62 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm26403-201ENSMUST00000158500 105 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm25711-201ENSMUST00000158633 128 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm37693-201ENSMUST00000194562 234 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm15235-201ENSMUST00000200572 194 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm26458-201ENSMUST00000082832 128 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Gm26175-201ENSMUST00000083794 131 ntBASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Pcdha1Q91Y21 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Pcdha1Q91Y21 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Pcdha1Q91Y21 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.84□□□□□ -1.96
Pcdha1Q91Y21 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm26293-201ENSMUST00000104170 84 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm6952-201ENSMUST00000118629 159 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm8260-201ENSMUST00000119230 353 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm24291-201ENSMUST00000157633 162 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm22381-201ENSMUST00000158186 107 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm23409-201ENSMUST00000158516 237 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm25491-201ENSMUST00000158733 308 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm24736-201ENSMUST00000158862 130 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm16162-201ENSMUST00000162296 297 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm25464-201ENSMUST00000175481 107 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Gm24304-201ENSMUST00000177635 107 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.83□□□□□ -1.96
Pcdha1Q91Y21 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms