Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm37399-201ENSMUST00000195224 416 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24625-201ENSMUST00000082622 130 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23097-201ENSMUST00000083448 105 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23836-201ENSMUST00000104434 129 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm13729-201ENSMUST00000120328 406 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23169-201ENSMUST00000157157 112 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23106-201ENSMUST00000157554 101 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23760-201ENSMUST00000158350 116 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22011-201ENSMUST00000158790 123 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26200-201ENSMUST00000180273 79 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm27313-201ENSMUST00000183500 142 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm9227-201ENSMUST00000194733 566 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm43250-201ENSMUST00000196536 273 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm45402-201ENSMUST00000211796 223 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.64□□□□□ -2.31
Ccdc28aQ8CEI3 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22935-201ENSMUST00000103960 104 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Mir1b-201ENSMUST00000117012 122 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm11386-201ENSMUST00000117761 347 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Mir5104-201ENSMUST00000175319 94 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26968-201ENSMUST00000182894 481 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm28343-201ENSMUST00000185386 112 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm42855-201ENSMUST00000197388 253 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24035-201ENSMUST00000082867 107 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.63□□□□□ -2.31
Ccdc28aQ8CEI3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25506-201ENSMUST00000104339 70 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm11572-201ENSMUST00000119164 120 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm12143-201ENSMUST00000119666 332 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22279-201ENSMUST00000157200 93 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24618-201ENSMUST00000177718 94 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23953-201ENSMUST00000178214 94 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26332-201ENSMUST00000179813 94 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22863-201ENSMUST00000180265 94 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Mir6346-201ENSMUST00000183982 81 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm37918-201ENSMUST00000192071 120 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm36953-201ENSMUST00000195295 268 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm20144-201ENSMUST00000203031 165 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm46993-201ENSMUST00000220708 259 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22306-201ENSMUST00000082692 107 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24150-201ENSMUST00000082759 104 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24355-201ENSMUST00000082858 122 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25579-201ENSMUST00000083407 106 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23041-201ENSMUST00000083868 106 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.62□□□□□ -2.31
Ccdc28aQ8CEI3 Mir695-201ENSMUST00000102261 109 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm14922-201ENSMUST00000121131 163 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm15899-201ENSMUST00000128586 238 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22403-201ENSMUST00000174919 84 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26180-201ENSMUST00000179942 107 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm17067-202ENSMUST00000180131 123 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Mir7059-201ENSMUST00000184825 59 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm28992-201ENSMUST00000190534 139 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm43911-201ENSMUST00000203097 76 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm44010-201ENSMUST00000204432 331 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25578-201ENSMUST00000083406 104 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm26164-201ENSMUST00000083793 104 ntBASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Ccdc28aQ8CEI3 Gm14296-202ENSMUST00000108931 750 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm12770-201ENSMUST00000121734 462 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23328-201ENSMUST00000157418 132 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms