Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm24698-201ENSMUST00000083883 130 ntBASIC2.59□□□□□ -1.99
Ccdc87Q8CDL9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.59□□□□□ -1.99
Ccdc87Q8CDL9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ccdc87Q8CDL9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Ccdc87Q8CDL9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm26135-201ENSMUST00000101993 72 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm25529-201ENSMUST00000104850 92 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm23841-201ENSMUST00000116951 114 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm13913-201ENSMUST00000121126 260 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm24922-201ENSMUST00000158511 102 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm22433-201ENSMUST00000158550 142 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm17052-201ENSMUST00000165496 289 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm17161-201ENSMUST00000169187 524 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Snord50b-201ENSMUST00000178497 72 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm23002-201ENSMUST00000179221 107 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm25820-201ENSMUST00000198589 127 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm26493-201ENSMUST00000083155 136 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Ccdc87Q8CDL9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.58□□□□□ -2
Ccdc87Q8CDL9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc87Q8CDL9 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm24283-201ENSMUST00000104233 107 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm25863-201ENSMUST00000158249 329 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm24390-201ENSMUST00000179578 62 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm27421-201ENSMUST00000184729 167 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.57□□□□□ -2
Ccdc87Q8CDL9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm6574-201ENSMUST00000120037 362 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm24594-201ENSMUST00000122502 99 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm23642-201ENSMUST00000157858 258 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm22731-201ENSMUST00000158086 94 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm23892-201ENSMUST00000158105 130 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm22348-201ENSMUST00000178674 79 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm22510-201ENSMUST00000179304 79 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm26336-201ENSMUST00000179449 79 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm26390-201ENSMUST00000179628 79 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm29022-201ENSMUST00000190702 225 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm44352-201ENSMUST00000196358 110 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Mir3961-201ENSMUST00000198795 59 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.56□□□□□ -2
Ccdc87Q8CDL9 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Mir541-201ENSMUST00000102097 90 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm23060-201ENSMUST00000102345 109 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm23536-201ENSMUST00000157541 134 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm22097-201ENSMUST00000157929 278 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Mir410-201ENSMUST00000083563 81 ntBASIC2.55□□□□□ -2
Ccdc87Q8CDL9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm24440-201ENSMUST00000157236 63 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm25866-201ENSMUST00000158245 112 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Mir1927-201ENSMUST00000158579 109 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm24512-201ENSMUST00000174963 65 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm24510-201ENSMUST00000174965 94 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm26494-201ENSMUST00000083154 143 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm24493-201ENSMUST00000083805 143 ntBASIC2.54□□□□□ -2
Ccdc87Q8CDL9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm22935-201ENSMUST00000103960 104 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm14748-201ENSMUST00000119819 411 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm25491-201ENSMUST00000158733 308 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.53□□□□□ -2
Ccdc87Q8CDL9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc87Q8CDL9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc87Q8CDL9 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc87Q8CDL9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.52□□□□□ -2.01
Ccdc87Q8CDL9 Gm14652-201ENSMUST00000118479 235 ntBASIC2.52□□□□□ -2.01
Ccdc87Q8CDL9 Gm26150-201ENSMUST00000157426 151 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 194.3 ms