Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm27285-201ENSMUST00000183875 127 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm19901-201ENSMUST00000192191 495 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm37997-201ENSMUST00000193515 267 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Mir465d-201ENSMUST00000196314 58 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm26265-202ENSMUST00000196326 133 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.57□□□□□ -2
Trerf1Q8BXJ2 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm18188-201ENSMUST00000219386 478 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trerf1Q8BXJ2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm13885-201ENSMUST00000117569 187 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm12926-201ENSMUST00000121158 409 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm24204-201ENSMUST00000082950 107 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm22828-201ENSMUST00000083768 107 ntBASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trerf1Q8BXJ2 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm23982-201ENSMUST00000157141 106 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm23219-201ENSMUST00000158123 87 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm24131-201ENSMUST00000158539 107 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm43427-201ENSMUST00000198188 331 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm43993-201ENSMUST00000203972 247 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm24148-201ENSMUST00000082762 80 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Mir146-201ENSMUST00000083667 65 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm24762-201ENSMUST00000083689 104 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Gm24163-201ENSMUST00000093660 132 ntBASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trerf1Q8BXJ2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm24132-201ENSMUST00000104745 91 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm22500-201ENSMUST00000158982 99 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm25813-201ENSMUST00000082748 191 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Gm26126-201ENSMUST00000083188 164 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.54□□□□□ -2
Trerf1Q8BXJ2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm11786-201ENSMUST00000120799 155 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm23466-201ENSMUST00000157133 106 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Snord11-201ENSMUST00000158468 84 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Mir1927-201ENSMUST00000158579 109 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm24304-201ENSMUST00000177635 107 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm24355-201ENSMUST00000082858 122 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm23039-201ENSMUST00000083870 161 ntBASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
Trerf1Q8BXJ2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.53□□□□□ -2.01
Trerf1Q8BXJ2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm24594-201ENSMUST00000122502 99 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm23535-201ENSMUST00000157542 106 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm26022-201ENSMUST00000158663 108 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm24573-201ENSMUST00000175499 112 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm25253-201ENSMUST00000179958 107 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm43676-201ENSMUST00000197532 540 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm45543-201ENSMUST00000209327 88 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm22299-201ENSMUST00000082663 136 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Gm24044-201ENSMUST00000083107 156 ntBASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trerf1Q8BXJ2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trerf1Q8BXJ2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.51□□□□□ -2.01
Trerf1Q8BXJ2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms