Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm25797-201ENSMUST00000082640 107 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm25142-201ENSMUST00000082698 107 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm22421-201ENSMUST00000083058 107 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm26249-201ENSMUST00000116708 118 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm11285-201ENSMUST00000118443 322 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25098-201ENSMUST00000177580 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm23356-201ENSMUST00000177610 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24027-201ENSMUST00000177611 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22511-201ENSMUST00000177628 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22630-201ENSMUST00000177781 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm23560-201ENSMUST00000177782 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25462-201ENSMUST00000177833 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm26059-201ENSMUST00000177865 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22255-201ENSMUST00000177933 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25146-201ENSMUST00000177976 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25523-201ENSMUST00000178044 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24585-201ENSMUST00000178104 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22627-201ENSMUST00000178127 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22912-201ENSMUST00000178242 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24866-201ENSMUST00000178338 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22524-201ENSMUST00000178357 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25710-201ENSMUST00000178367 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm23575-201ENSMUST00000178406 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24872-201ENSMUST00000178434 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22449-201ENSMUST00000178924 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24702-201ENSMUST00000178965 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24206-201ENSMUST00000179011 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24528-201ENSMUST00000179164 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm22909-201ENSMUST00000179190 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm26334-201ENSMUST00000179403 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25463-201ENSMUST00000179405 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25742-201ENSMUST00000179530 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25209-201ENSMUST00000179576 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm26392-201ENSMUST00000179661 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25230-201ENSMUST00000179740 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm26434-201ENSMUST00000179778 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm25741-201ENSMUST00000179825 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24759-201ENSMUST00000179827 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm24219-201ENSMUST00000179861 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm38311-201ENSMUST00000192945 165 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Mir3969-201ENSMUST00000197106 92 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Mir7118-201ENSMUST00000197760 61 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm23254-201ENSMUST00000097244 79 ntBASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Usp40Q8BWR4 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm26051-201ENSMUST00000104642 93 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm14020-201ENSMUST00000118165 662 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm23600-201ENSMUST00000157260 71 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm27520-201ENSMUST00000184872 81 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm29604-201ENSMUST00000187176 163 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm43324-201ENSMUST00000197482 289 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm43676-201ENSMUST00000197532 540 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Mir378a-201ENSMUST00000198300 66 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm23038-201ENSMUST00000083873 104 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp40Q8BWR4 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm26135-201ENSMUST00000101993 72 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Snord64-201ENSMUST00000104003 67 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm12443-201ENSMUST00000122308 323 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Snord50b-201ENSMUST00000178497 72 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm25198-201ENSMUST00000178574 110 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm43680-201ENSMUST00000199466 340 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm22978-201ENSMUST00000082607 160 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm23445-201ENSMUST00000082800 107 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm23850-201ENSMUST00000083830 169 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm24698-201ENSMUST00000083883 130 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp40Q8BWR4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm25267-201ENSMUST00000158522 63 ntBASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm34139-201ENSMUST00000196166 294 ntBASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm43587-201ENSMUST00000199590 204 ntBASIC3.41□□□□□ -1.86
Usp40Q8BWR4 Gm26015-201ENSMUST00000104402 125 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm22105-201ENSMUST00000116734 116 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm22679-201ENSMUST00000116975 100 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms