Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm3867-201ENSMUST00000086108 279 ntBASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Gm25884-201ENSMUST00000157782 62 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm25434-201ENSMUST00000158278 167 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm22403-201ENSMUST00000174919 84 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm25069-201ENSMUST00000175238 86 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Mir3098-201ENSMUST00000175416 87 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Mir8119-201ENSMUST00000183371 129 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm28992-201ENSMUST00000190534 139 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm44960-201ENSMUST00000207403 141 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm11351-202ENSMUST00000225724 478 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm24966-201ENSMUST00000082443 79 ntBASIC1.18□□□□□ -2.22
Ccdc40Q8BI79 Gm12770-201ENSMUST00000121734 462 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm16358-201ENSMUST00000146046 210 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm23083-201ENSMUST00000157851 116 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm26180-201ENSMUST00000179942 107 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm20118-201ENSMUST00000187207 162 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm18291-201ENSMUST00000190791 301 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm23627-201ENSMUST00000082459 107 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm22502-201ENSMUST00000082488 107 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm22977-201ENSMUST00000082615 107 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm24149-201ENSMUST00000082757 107 ntBASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ccdc40Q8BI79 Gm14846-201ENSMUST00000121868 216 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm22279-201ENSMUST00000157200 93 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm25909-201ENSMUST00000157619 121 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm24853-201ENSMUST00000158026 121 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm22425-201ENSMUST00000158532 138 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm26029-201ENSMUST00000158659 132 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm24020-201ENSMUST00000180156 108 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm27420-201ENSMUST00000183823 79 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm28661-201ENSMUST00000188231 681 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm24355-201ENSMUST00000082858 122 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm25683-201ENSMUST00000083940 131 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.16□□□□□ -2.22
Ccdc40Q8BI79 Gm26339-201ENSMUST00000102368 99 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm15443-201ENSMUST00000118947 820 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm12512-201ENSMUST00000119620 217 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm44465-201ENSMUST00000199536 114 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm22306-201ENSMUST00000082692 107 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm24163-201ENSMUST00000093660 132 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.15□□□□□ -2.23
Ccdc40Q8BI79 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm11859-201ENSMUST00000118099 455 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm14775-201ENSMUST00000122089 310 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm23106-201ENSMUST00000157554 101 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm23022-201ENSMUST00000158768 180 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm2962-201ENSMUST00000159266 336 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm28408-201ENSMUST00000191557 463 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm43220-201ENSMUST00000199299 282 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm22685-201ENSMUST00000082848 106 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm25513-201ENSMUST00000083861 162 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.14□□□□□ -2.23
Ccdc40Q8BI79 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Gm22780-201ENSMUST00000104084 132 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Gm25377-201ENSMUST00000104334 129 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Gm12433-201ENSMUST00000119659 255 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Gm26089-201ENSMUST00000157898 107 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Mir3087-201ENSMUST00000199405 56 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Gm45268-201ENSMUST00000210046 370 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Ccdc40Q8BI79 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.12□□□□□ -2.23
Ccdc40Q8BI79 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc40Q8BI79 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.12□□□□□ -2.23
Ccdc40Q8BI79 Mir155-201ENSMUST00000083463 65 ntBASIC1.12□□□□□ -2.23
Ccdc40Q8BI79 Gm12748-201ENSMUST00000120763 504 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 Gm22555-201ENSMUST00000157801 62 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 Mir6381-201ENSMUST00000183426 87 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 Gm37801-201ENSMUST00000194754 274 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 Gm5023-201ENSMUST00000217442 587 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.11□□□□□ -2.23
Ccdc40Q8BI79 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Mir343-201ENSMUST00000102360 75 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm14782-201ENSMUST00000120151 195 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm23893-201ENSMUST00000158106 134 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm24818-201ENSMUST00000175093 161 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms