Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm23299-201ENSMUST00000082708 79 ntBASIC0.84□□□□□ -2.27
Clrn3Q8BHH8 Gm25789-201ENSMUST00000083294 76 ntBASIC0.84□□□□□ -2.27
Clrn3Q8BHH8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.84□□□□□ -2.27
Clrn3Q8BHH8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Clrn3Q8BHH8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Gm22279-201ENSMUST00000157200 93 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Gm23328-201ENSMUST00000157418 132 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Gm26004-201ENSMUST00000158804 116 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Gm26430-201ENSMUST00000178054 107 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Gm20144-201ENSMUST00000203031 165 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.83□□□□□ -2.28
Clrn3Q8BHH8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm23013-201ENSMUST00000104146 106 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm13341-201ENSMUST00000120780 672 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm23760-201ENSMUST00000158350 116 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm25166-201ENSMUST00000158909 111 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm7258-201ENSMUST00000179317 300 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm37713-201ENSMUST00000191746 198 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm45119-201ENSMUST00000207612 199 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm9795-201ENSMUST00000062156 693 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm25801-201ENSMUST00000082638 106 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Mir196b-201ENSMUST00000083509 85 ntBASIC0.82□□□□□ -2.28
Clrn3Q8BHH8 Gm24271-201ENSMUST00000102327 111 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm23106-201ENSMUST00000157554 101 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm23016-201ENSMUST00000158431 62 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm27236-201ENSMUST00000184147 442 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm28661-201ENSMUST00000188231 681 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm45402-201ENSMUST00000211796 223 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm33654-201ENSMUST00000221704 215 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Gm11351-202ENSMUST00000225724 478 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Mir27b-201ENSMUST00000083541 73 ntBASIC0.81□□□□□ -2.28
Clrn3Q8BHH8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Mir1b-201ENSMUST00000117012 122 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm13720-201ENSMUST00000120741 196 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm22228-201ENSMUST00000157364 101 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm20462-201ENSMUST00000172623 408 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm25314-201ENSMUST00000178810 79 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm44726-201ENSMUST00000203427 217 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
Clrn3Q8BHH8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm14296-202ENSMUST00000108931 750 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm16358-201ENSMUST00000146046 210 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm27640-201ENSMUST00000184580 147 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm27545-201ENSMUST00000184755 202 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm10264-201ENSMUST00000220589 429 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.79□□□□□ -2.28
Clrn3Q8BHH8 Gm25414-201ENSMUST00000101814 107 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm24277-201ENSMUST00000158661 104 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Mir1954-201ENSMUST00000175595 86 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm26652-202ENSMUST00000181672 475 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm28992-201ENSMUST00000190534 139 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm28408-201ENSMUST00000191557 463 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Gm25851-201ENSMUST00000082794 107 ntBASIC0.78□□□□□ -2.28
Clrn3Q8BHH8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm11522-201ENSMUST00000120533 176 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm11334-201ENSMUST00000121969 156 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm25559-201ENSMUST00000157182 74 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm25884-201ENSMUST00000157782 62 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm22447-201ENSMUST00000158155 92 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm25011-201ENSMUST00000158398 126 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm22435-201ENSMUST00000158552 128 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm44960-201ENSMUST00000207403 141 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm18188-201ENSMUST00000219386 478 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm22704-201ENSMUST00000083027 137 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Mir155-201ENSMUST00000083463 65 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 Gm25513-201ENSMUST00000083861 162 ntBASIC0.77□□□□□ -2.29
Clrn3Q8BHH8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.76□□□□□ -2.29
Clrn3Q8BHH8 Gm23766-201ENSMUST00000103894 80 ntBASIC0.76□□□□□ -2.29
Clrn3Q8BHH8 Gm25805-201ENSMUST00000122788 108 ntBASIC0.76□□□□□ -2.29
Clrn3Q8BHH8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.76□□□□□ -2.29
Clrn3Q8BHH8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Clrn3Q8BHH8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms