Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm28992-201ENSMUST00000190534 139 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm26379-202ENSMUST00000200225 132 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm25813-201ENSMUST00000082748 191 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm26493-201ENSMUST00000083155 136 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm25875-201ENSMUST00000104323 107 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm24079-201ENSMUST00000104352 132 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm22321-201ENSMUST00000157152 104 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm22101-201ENSMUST00000157928 103 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm24394-201ENSMUST00000158141 123 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Mir7679-201ENSMUST00000183379 63 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Mir7225-201ENSMUST00000184178 54 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Mir7021-201ENSMUST00000197026 63 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm23378-201ENSMUST00000082942 107 ntBASIC2.33□□□□□ -2.04
Ddx58Q6Q899 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm11904-201ENSMUST00000120562 248 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm26479-201ENSMUST00000122620 106 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm24632-201ENSMUST00000122770 323 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm8121-201ENSMUST00000153583 499 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Mir1949-201ENSMUST00000157434 141 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm24847-201ENSMUST00000158032 108 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm26405-201ENSMUST00000158495 100 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Mir6352-201ENSMUST00000184495 116 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm44055-201ENSMUST00000204376 247 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm23679-201ENSMUST00000083161 119 ntBASIC2.32□□□□□ -2.04
Ddx58Q6Q899 Gm22935-201ENSMUST00000103960 104 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Gm25111-201ENSMUST00000116686 147 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Gm25113-201ENSMUST00000157185 143 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Gm22883-201ENSMUST00000157376 106 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Gm24225-201ENSMUST00000158825 98 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Snord118-201ENSMUST00000082965 135 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Mir107-201ENSMUST00000083660 87 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Snora33-201ENSMUST00000093556 129 ntBASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.31□□□□□ -2.04
Ddx58Q6Q899 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Gm25377-201ENSMUST00000104334 129 ntBASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Gm26150-201ENSMUST00000157426 151 ntBASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Gm27747-201ENSMUST00000184707 85 ntBASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Gm11351-202ENSMUST00000225724 478 ntBASIC2.3□□□□□ -2.04
Ddx58Q6Q899 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ddx58Q6Q899 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm24277-201ENSMUST00000158661 104 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm37778-201ENSMUST00000191732 190 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm43427-201ENSMUST00000198188 331 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm24966-201ENSMUST00000082443 79 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Mir301-201ENSMUST00000083655 86 ntBASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ddx58Q6Q899 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm23854-201ENSMUST00000158378 108 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm23581-201ENSMUST00000158531 63 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm17161-201ENSMUST00000169187 524 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm20477-201ENSMUST00000174028 280 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm24510-201ENSMUST00000174965 94 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.28□□□□□ -2.04
Ddx58Q6Q899 Gm23469-201ENSMUST00000157131 104 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Gm24851-201ENSMUST00000158028 103 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Gm25658-201ENSMUST00000158472 128 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Mir6905-201ENSMUST00000184228 70 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Gm9795-201ENSMUST00000062156 693 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Gm10092-201ENSMUST00000077110 180 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Gm24536-201ENSMUST00000083144 107 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Mir30d-201ENSMUST00000083503 82 ntBASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ddx58Q6Q899 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm22075-201ENSMUST00000158599 192 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm22118-201ENSMUST00000175593 171 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm44491-201ENSMUST00000196794 96 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm35736-201ENSMUST00000203681 313 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm44938-201ENSMUST00000208614 427 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm44959-201ENSMUST00000209127 231 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm23970-201ENSMUST00000083319 107 ntBASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Ddx58Q6Q899 Mir767-201ENSMUST00000103256 107 ntBASIC2.25□□□□□ -2.05
Ddx58Q6Q899 Mir293-201ENSMUST00000104841 80 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms