Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm44938-201ENSMUST00000208614 427 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm45313-201ENSMUST00000210584 178 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm25402-201ENSMUST00000082966 131 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm24164-201ENSMUST00000093663 104 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm25938-201ENSMUST00000104139 166 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm23109-201ENSMUST00000116867 126 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm14919-201ENSMUST00000120839 390 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm22027-201ENSMUST00000122737 127 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm15281-201ENSMUST00000125181 351 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm9156-201ENSMUST00000189660 463 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm44308-201ENSMUST00000197080 99 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm25820-201ENSMUST00000198589 127 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.17□□□□□ -2.06
Smarca1Q6PGB8 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 Gm23043-201ENSMUST00000157890 109 ntBASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 Gm35736-201ENSMUST00000203681 313 ntBASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 Mir301-201ENSMUST00000083655 86 ntBASIC2.16□□□□□ -2.06
Smarca1Q6PGB8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Smarca1Q6PGB8 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm25371-201ENSMUST00000158162 101 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm23854-201ENSMUST00000158378 108 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm27521-201ENSMUST00000184022 64 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm29490-201ENSMUST00000190923 342 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm43427-201ENSMUST00000198188 331 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm26497-201ENSMUST00000083146 107 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm22723-201ENSMUST00000083820 129 ntBASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Smarca1Q6PGB8 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm11904-201ENSMUST00000120562 248 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm24847-201ENSMUST00000158032 108 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm16162-201ENSMUST00000162296 297 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Mir6388-201ENSMUST00000184417 75 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm27544-201ENSMUST00000185069 155 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm23679-201ENSMUST00000083161 119 ntBASIC2.14□□□□□ -2.07
Smarca1Q6PGB8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Mir767-201ENSMUST00000103256 107 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm22935-201ENSMUST00000103960 104 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm15162-201ENSMUST00000119325 283 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm26479-201ENSMUST00000122620 106 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm24632-201ENSMUST00000122770 323 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm17161-201ENSMUST00000169187 524 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm20477-201ENSMUST00000174028 280 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm27898-201ENSMUST00000183987 80 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm10222-201ENSMUST00000088336 294 ntBASIC2.13□□□□□ -2.07
Smarca1Q6PGB8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Gm22883-201ENSMUST00000157376 106 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Gm24851-201ENSMUST00000158028 103 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Gm22075-201ENSMUST00000158599 192 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Mir7021-201ENSMUST00000197026 63 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Gm23378-201ENSMUST00000082942 107 ntBASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Smarca1Q6PGB8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm12512-201ENSMUST00000119620 217 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm15692-201ENSMUST00000152173 352 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm22321-201ENSMUST00000157152 104 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm24394-201ENSMUST00000158141 123 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm23813-201ENSMUST00000175153 77 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Mir7217-201ENSMUST00000200304 62 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm45907-201ENSMUST00000213023 193 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm10092-201ENSMUST00000077110 180 ntBASIC2.11□□□□□ -2.07
Smarca1Q6PGB8 Gm26135-201ENSMUST00000101993 72 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Gm23581-201ENSMUST00000158531 63 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Snord87-201ENSMUST00000175437 87 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Snord50b-201ENSMUST00000178497 72 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Gm38060-201ENSMUST00000194822 464 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Gm42774-201ENSMUST00000198854 283 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Gm24966-201ENSMUST00000082443 79 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Gm26922-201ENSMUST00000082687 72 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Mir30d-201ENSMUST00000083503 82 ntBASIC2.1□□□□□ -2.07
Smarca1Q6PGB8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm24283-201ENSMUST00000104233 107 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm25111-201ENSMUST00000116686 147 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm11606-201ENSMUST00000120706 617 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm15861-201ENSMUST00000120979 339 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 215.4 ms