Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gm26126-201ENSMUST00000083188 164 ntBASIC1.51□□□□□ -2.17
Ccdc36Q6PDM4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.51□□□□□ -2.17
Ccdc36Q6PDM4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.51□□□□□ -2.17
Ccdc36Q6PDM4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm15010-201ENSMUST00000117153 407 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm11936-201ENSMUST00000118323 160 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm5396-201ENSMUST00000121222 532 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Mir6997-201ENSMUST00000184313 71 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm45365-201ENSMUST00000209489 256 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm10222-201ENSMUST00000088336 294 ntBASIC1.5□□□□□ -2.17
Ccdc36Q6PDM4 Gm22984-201ENSMUST00000122751 122 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm23589-201ENSMUST00000157660 105 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm22800-201ENSMUST00000175627 94 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Snora15-201ENSMUST00000177461 131 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm27271-201ENSMUST00000183509 170 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Mir7683-201ENSMUST00000183842 61 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Mir7021-201ENSMUST00000197026 63 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm45859-201ENSMUST00000212794 214 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm18617-201ENSMUST00000222311 259 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm25813-201ENSMUST00000082748 191 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm24356-201ENSMUST00000082859 106 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm23462-201ENSMUST00000083264 104 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm22294-201ENSMUST00000083308 104 ntBASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc36Q6PDM4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm26479-201ENSMUST00000122620 106 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm23640-201ENSMUST00000157860 104 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm22537-201ENSMUST00000158172 199 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm25012-201ENSMUST00000158396 164 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm25933-201ENSMUST00000178943 108 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm26200-201ENSMUST00000180273 79 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm44429-201ENSMUST00000203542 186 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm43993-201ENSMUST00000203972 247 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm9795-201ENSMUST00000062156 693 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Rny1-201ENSMUST00000083767 112 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.48□□□□□ -2.17
Ccdc36Q6PDM4 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm25421-201ENSMUST00000104218 164 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm25875-201ENSMUST00000104323 107 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm13588-201ENSMUST00000120026 135 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm24478-201ENSMUST00000157439 158 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm23535-201ENSMUST00000157542 106 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm25664-201ENSMUST00000157697 107 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm25718-201ENSMUST00000158632 118 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm7958-201ENSMUST00000178255 468 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm7950-201ENSMUST00000179633 468 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Mir7226-201ENSMUST00000184953 60 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Mir7678-201ENSMUST00000185076 71 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm28921-201ENSMUST00000190219 378 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm44666-201ENSMUST00000208544 391 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm24355-201ENSMUST00000082858 122 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gm23100-201ENSMUST00000083455 141 ntBASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc36Q6PDM4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm23951-201ENSMUST00000104029 132 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm23836-201ENSMUST00000104434 129 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm12797-201ENSMUST00000118645 273 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm6829-201ENSMUST00000119858 360 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm15365-201ENSMUST00000122392 300 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm22768-201ENSMUST00000158366 153 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Snord87-201ENSMUST00000175437 87 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm29167-201ENSMUST00000190024 377 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm19901-201ENSMUST00000192191 495 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm37763-201ENSMUST00000193445 120 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm44482-201ENSMUST00000199232 103 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Mir429-201ENSMUST00000083493 83 ntBASIC1.46□□□□□ -2.18
Ccdc36Q6PDM4 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms