Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Mir6419-201ENSMUST00000184784 113 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trim27Q62158 Gm35736-201ENSMUST00000203681 313 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trim27Q62158 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Gm25078-201ENSMUST00000082530 107 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Snora3-201ENSMUST00000083082 132 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Gm24765-201ENSMUST00000083691 103 ntBASIC1.86□□□□□ -2.11
Trim27Q62158 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim27Q62158 Gm24275-201ENSMUST00000116780 146 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm22032-201ENSMUST00000116946 116 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm11572-201ENSMUST00000119164 120 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm14937-201ENSMUST00000119709 208 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm25914-201ENSMUST00000157618 153 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm23558-201ENSMUST00000157823 80 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm37763-201ENSMUST00000193445 120 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Trim27Q62158 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim27Q62158 Gm45543-201ENSMUST00000209327 88 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.85□□□□□ -2.11
Trim27Q62158 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trim27Q62158 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Mir873a-201ENSMUST00000104863 77 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm14761-201ENSMUST00000121363 262 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm6025-201ENSMUST00000121517 201 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm22556-201ENSMUST00000157803 100 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm23024-201ENSMUST00000158770 292 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm24737-201ENSMUST00000158861 100 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Mir3057-201ENSMUST00000175040 91 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm27540-201ENSMUST00000184950 187 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm29661-201ENSMUST00000186781 315 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm29308-201ENSMUST00000188863 315 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm28992-201ENSMUST00000190534 139 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm37404-201ENSMUST00000195726 359 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm23370-201ENSMUST00000199545 130 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm25793-201ENSMUST00000083287 107 ntBASIC1.84□□□□□ -2.11
Trim27Q62158 Gm22082-201ENSMUST00000157587 161 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 Gm24668-201ENSMUST00000158935 104 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.83□□□□□ -2.12
Trim27Q62158 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 Gm26111-201ENSMUST00000083969 106 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 Gm24164-201ENSMUST00000093663 104 ntBASIC1.83□□□□□ -2.12
Trim27Q62158 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim27Q62158 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trim27Q62158 Gm25318-201ENSMUST00000122554 314 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Gm23474-201ENSMUST00000158884 75 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Gm22114-201ENSMUST00000177756 107 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Gm28418-201ENSMUST00000186179 423 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Mir3535-201ENSMUST00000197651 147 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Gm43505-201ENSMUST00000200579 139 ntBASIC1.82□□□□□ -2.12
Trim27Q62158 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trim27Q62158 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm24277-201ENSMUST00000158661 104 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm17919-201ENSMUST00000173344 312 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm27517-201ENSMUST00000184347 236 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29512-201ENSMUST00000185544 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28110-201ENSMUST00000185782 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29057-201ENSMUST00000186468 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28737-201ENSMUST00000186808 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29118-201ENSMUST00000186908 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28433-201ENSMUST00000187085 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28759-201ENSMUST00000187621 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28831-201ENSMUST00000187739 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28200-201ENSMUST00000187778 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28849-201ENSMUST00000188127 174 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28752-201ENSMUST00000188340 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29378-201ENSMUST00000188723 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28569-201ENSMUST00000188748 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28120-201ENSMUST00000188812 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28369-201ENSMUST00000188993 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29037-201ENSMUST00000189092 313 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28909-201ENSMUST00000189406 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28861-201ENSMUST00000189681 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29180-201ENSMUST00000190003 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm28330-201ENSMUST00000190353 171 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29575-201ENSMUST00000190597 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Gm29469-201ENSMUST00000191448 315 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.81□□□□□ -2.12
Trim27Q62158 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trim27Q62158 Mir759-201ENSMUST00000103254 98 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Gm23221-201ENSMUST00000158118 93 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Mir5624-201ENSMUST00000176635 61 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Gm24638-201ENSMUST00000179807 132 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Gm37693-201ENSMUST00000194562 234 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Gm45754-201ENSMUST00000212380 279 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms