| Gli3 | Q61602 | Gm25876-201 | ENSMUST00000104329 | 119 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm23836-201 | ENSMUST00000104434 | 129 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm11512-201 | ENSMUST00000119669 | 663 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Obox4-ps34-201 | ENSMUST00000175879 | 520 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm37438-201 | ENSMUST00000192813 | 393 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm44337-201 | ENSMUST00000196553 | 114 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Olfr795-ps1-201 | ENSMUST00000205245 | 763 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm9772-201 | ENSMUST00000075018 | 408 nt | APPRIS P1 TSL 5 BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm25404-201 | ENSMUST00000082970 | 107 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | 8030445P17Rik-201 | ENSMUST00000192614 | 2741 nt | BASIC | 0.55 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | AC154515.1-201 | ENSMUST00000226085 | 2841 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm24517-201 | ENSMUST00000122560 | 107 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm23777-201 | ENSMUST00000158994 | 259 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm2962-201 | ENSMUST00000159266 | 336 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Cypt14-201 | ENSMUST00000179096 | 508 nt | APPRIS P1 TSL 1 (best) BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm25121-201 | ENSMUST00000179846 | 79 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm29490-201 | ENSMUST00000190923 | 342 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm37399-201 | ENSMUST00000195224 | 416 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm43556-201 | ENSMUST00000196186 | 681 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm43432-201 | ENSMUST00000196352 | 121 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | AC124772.1-201 | ENSMUST00000221325 | 151 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Mir216a-201 | ENSMUST00000083605 | 72 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm10542-201 | ENSMUST00000097586 | 273 nt | APPRIS P1 TSL 5 BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | AC102369.2-201 | ENSMUST00000219725 | 1679 nt | BASIC | 0.54 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm26338-201 | ENSMUST00000102372 | 110 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm25544-201 | ENSMUST00000122676 | 120 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm12434-201 | ENSMUST00000141580 | 653 nt | TSL 1 (best) BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm22403-201 | ENSMUST00000174919 | 84 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm23145-201 | ENSMUST00000178912 | 79 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Mir496b-201 | ENSMUST00000184935 | 113 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm38261-201 | ENSMUST00000192608 | 316 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm37693-201 | ENSMUST00000194562 | 234 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm26265-202 | ENSMUST00000196326 | 133 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm17906-201 | ENSMUST00000202480 | 901 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm45315-201 | ENSMUST00000209283 | 333 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm36368-201 | ENSMUST00000212026 | 461 nt | APPRIS P1 TSL 5 BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | CT485607.2-201 | ENSMUST00000214650 | 91 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm46997-201 | ENSMUST00000222108 | 217 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | AC168056.1-201 | ENSMUST00000225270 | 180 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Olfr1317-201 | ENSMUST00000060098 | 951 nt | APPRIS P1 BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm24623-201 | ENSMUST00000082616 | 194 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Gm24625-201 | ENSMUST00000082622 | 130 nt | BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Zfp616-205 | ENSMUST00000178159 | 2964 nt | APPRIS P1 BASIC | 0.53 | □□□□□ -2.32 | | |
| Gli3 | Q61602 | Mir701-201 | ENSMUST00000102208 | 109 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm14007-201 | ENSMUST00000118288 | 210 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm25663-201 | ENSMUST00000157698 | 135 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Mir5104-201 | ENSMUST00000175319 | 94 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm26501-201 | ENSMUST00000178307 | 107 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm27385-201 | ENSMUST00000184747 | 104 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm28408-201 | ENSMUST00000191557 | 463 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm43810-201 | ENSMUST00000201018 | 232 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm44923-201 | ENSMUST00000206673 | 85 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | AC164161.1-201 | ENSMUST00000214076 | 639 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | AC153968.2-201 | ENSMUST00000215579 | 1140 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | CT009733.1-203 | ENSMUST00000224033 | 451 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm9795-201 | ENSMUST00000062156 | 693 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Tas2r107-201 | ENSMUST00000065781 | 1032 nt | APPRIS P1 BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | DQ267101-201 | ENSMUST00000082562 | 73 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm25357-201 | ENSMUST00000082745 | 72 nt | BASIC | 0.53 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm14917-201 | ENSMUST00000118872 | 2105 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm9059-201 | ENSMUST00000118319 | 183 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm24198-201 | ENSMUST00000157812 | 108 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm22733-201 | ENSMUST00000158094 | 91 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm23025-201 | ENSMUST00000158769 | 111 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm15680-201 | ENSMUST00000161597 | 465 nt | TSL 5 BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm24084-201 | ENSMUST00000175173 | 137 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Selenok-ps4-201 | ENSMUST00000178835 | 277 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm23144-201 | ENSMUST00000180226 | 107 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Ranbp2-ps11-201 | ENSMUST00000197185 | 387 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | AC192616.3-201 | ENSMUST00000220797 | 1124 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Sval3-201 | ENSMUST00000080742 | 550 nt | APPRIS P1 TSL 1 (best) BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Mir362-201 | ENSMUST00000093592 | 65 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm12080-201 | ENSMUST00000119821 | 1883 nt | BASIC | 0.52 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm24271-201 | ENSMUST00000102327 | 111 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm23203-201 | ENSMUST00000104374 | 107 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Mir465c-2-201 | ENSMUST00000104757 | 81 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm23036-201 | ENSMUST00000157885 | 99 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm25011-201 | ENSMUST00000158398 | 126 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm22308-201 | ENSMUST00000177609 | 107 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm19855-201 | ENSMUST00000210145 | 249 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm5010-201 | ENSMUST00000213131 | 260 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Mir465c-1-201 | ENSMUST00000093560 | 81 nt | BASIC | 0.51 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm15529-201 | ENSMUST00000121833 | 994 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm11240-201 | ENSMUST00000142047 | 751 nt | TSL 1 (best) BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm25413-201 | ENSMUST00000158544 | 312 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm28740-201 | ENSMUST00000186142 | 215 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm38333-201 | ENSMUST00000193608 | 604 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm44282-201 | ENSMUST00000203199 | 190 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm32300-201 | ENSMUST00000221735 | 515 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | AC130821.1-201 | ENSMUST00000221997 | 293 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Mir32-201 | ENSMUST00000083610 | 70 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm26377-201 | ENSMUST00000102184 | 108 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm22759-201 | ENSMUST00000102276 | 96 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm25317-201 | ENSMUST00000116824 | 129 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | n-R5s207-201 | ENSMUST00000122497 | 118 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm17332-201 | ENSMUST00000165626 | 87 nt | APPRIS P1 BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm24085-201 | ENSMUST00000175172 | 116 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Ranbp2-ps7-201 | ENSMUST00000183924 | 384 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm27624-201 | ENSMUST00000185047 | 177 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| Gli3 | Q61602 | Gm28917-201 | ENSMUST00000187294 | 237 nt | BASIC | 0.49 | □□□□□ -2.33 | | |