Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.38□□□□□ -2.03
Ift88Q61371 Gm23466-201ENSMUST00000157133 106 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm45456-201ENSMUST00000210841 243 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm45344-201ENSMUST00000211610 341 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm22248-201ENSMUST00000082482 150 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Mir344c-201ENSMUST00000103919 92 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm23889-201ENSMUST00000122689 104 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Trav20-201ENSMUST00000142754 347 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm22731-201ENSMUST00000158086 94 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm24837-201ENSMUST00000158683 81 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm27532-201ENSMUST00000183726 113 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.37□□□□□ -2.03
Ift88Q61371 Gm37081-201ENSMUST00000192034 196 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.37□□□□□ -2.03
Ift88Q61371 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.37□□□□□ -2.03
Ift88Q61371 Gm44555-201ENSMUST00000209008 148 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm44853-201ENSMUST00000209070 250 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Snora19-201ENSMUST00000082962 132 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm23658-201ENSMUST00000083233 132 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm23249-201ENSMUST00000083369 161 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm24817-201ENSMUST00000093672 105 ntBASIC2.37□□□□□ -2.03
Ift88Q61371 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Ift88Q61371 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.36□□□□□ -2.03
Ift88Q61371 Gm22935-201ENSMUST00000103960 104 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm14491-201ENSMUST00000121919 199 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm24627-201ENSMUST00000122764 138 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm25390-201ENSMUST00000157341 103 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm25654-201ENSMUST00000158467 88 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm26405-201ENSMUST00000158495 100 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm26022-201ENSMUST00000158663 108 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm28169-201ENSMUST00000190342 345 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Mir6925-201ENSMUST00000197857 70 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ift88Q61371 Gm25204-201ENSMUST00000082843 106 ntBASIC2.36□□□□□ -2.03
Ift88Q61371 Gm25376-201ENSMUST00000104340 133 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm11204-201ENSMUST00000122438 147 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm26026-201ENSMUST00000122726 123 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm24075-201ENSMUST00000158175 72 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm24277-201ENSMUST00000158661 104 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm23182-201ENSMUST00000158688 135 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm24510-201ENSMUST00000174965 94 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm27476-201ENSMUST00000183366 104 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm37746-201ENSMUST00000193249 198 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Gm7214-201ENSMUST00000222428 272 ntBASIC2.35□□□□□ -2.03
Ift88Q61371 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
Ift88Q61371 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm22782-201ENSMUST00000104082 132 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm14838-201ENSMUST00000118913 248 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Mir1951-201ENSMUST00000157981 89 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm26157-201ENSMUST00000158974 126 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm23090-201ENSMUST00000177331 78 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm27369-201ENSMUST00000185182 71 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm28900-201ENSMUST00000185232 156 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ift88Q61371 Gm45508-201ENSMUST00000209298 299 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Gm18617-201ENSMUST00000222311 259 ntBASIC2.34□□□□□ -2.03
Ift88Q61371 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Ift88Q61371 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.34□□□□□ -2.04
Ift88Q61371 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.34□□□□□ -2.04
Ift88Q61371 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ift88Q61371 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.33□□□□□ -2.04
Ift88Q61371 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ift88Q61371 Gm22338-201ENSMUST00000157715 129 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Mir1967-201ENSMUST00000157789 82 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm25460-201ENSMUST00000157954 127 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm25015-201ENSMUST00000158400 128 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm25491-201ENSMUST00000158733 308 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm22259-201ENSMUST00000178926 107 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.33□□□□□ -2.04
Ift88Q61371 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm35736-201ENSMUST00000203681 313 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Gm10360-201ENSMUST00000097219 272 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.33□□□□□ -2.04
Ift88Q61371 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ift88Q61371 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Ift88Q61371 Gm14748-201ENSMUST00000119819 411 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm26150-201ENSMUST00000157426 151 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm25424-201ENSMUST00000157612 58 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm22510-201ENSMUST00000179304 79 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm26336-201ENSMUST00000179449 79 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm26390-201ENSMUST00000179628 79 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm44491-201ENSMUST00000196794 96 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm45791-201ENSMUST00000212908 352 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 Gm22421-201ENSMUST00000083058 107 ntBASIC2.32□□□□□ -2.04
Ift88Q61371 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ift88Q61371 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ift88Q61371 Snord19-201ENSMUST00000104609 76 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Gm23545-201ENSMUST00000158205 104 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ift88Q61371 Mir497-201ENSMUST00000200557 84 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms