Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Mir7013-201ENSMUST00000183540 72 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Gm37557-201ENSMUST00000191640 139 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Gm25632-201ENSMUST00000083112 85 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Gm23039-201ENSMUST00000083870 161 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Mir471-201ENSMUST00000093596 67 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CtcfQ61164 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CtcfQ61164 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CtcfQ61164 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.44□□□□□ -2.02
CtcfQ61164 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CtcfQ61164 Snord19-201ENSMUST00000104609 76 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.43□□□□□ -2.02
CtcfQ61164 Gm22337-201ENSMUST00000157721 132 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Gm22316-201ENSMUST00000158012 216 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Gm17052-201ENSMUST00000165496 289 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Gm38183-201ENSMUST00000193189 205 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CtcfQ61164 Snora33-201ENSMUST00000093556 129 ntBASIC2.43□□□□□ -2.02
CtcfQ61164 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CtcfQ61164 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CtcfQ61164 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CtcfQ61164 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CtcfQ61164 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm25377-201ENSMUST00000104334 129 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm23324-201ENSMUST00000157421 131 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm26412-201ENSMUST00000157666 55 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm23209-201ENSMUST00000158667 110 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.42□□□□□ -2.02
CtcfQ61164 Gm44938-201ENSMUST00000208614 427 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm24204-201ENSMUST00000082950 107 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Gm26495-201ENSMUST00000083152 137 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Snora69-201ENSMUST00000083708 131 ntBASIC2.42□□□□□ -2.02
CtcfQ61164 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CtcfQ61164 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CtcfQ61164 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CtcfQ61164 Gm12512-201ENSMUST00000119620 217 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Gm15536-201ENSMUST00000121411 114 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Gm24053-201ENSMUST00000158620 105 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Gm27540-201ENSMUST00000184950 187 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Mir6376-201ENSMUST00000185149 131 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Gm26204-201ENSMUST00000082906 107 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.41□□□□□ -2.02
CtcfQ61164 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CtcfQ61164 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm13345-201ENSMUST00000121928 228 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm23589-201ENSMUST00000157660 105 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm23381-201ENSMUST00000157676 94 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CtcfQ61164 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CtcfQ61164 Mir7017-201ENSMUST00000184894 62 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm27369-201ENSMUST00000185182 71 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Trbv18-201ENSMUST00000194256 294 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CtcfQ61164 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CtcfQ61164 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.4□□□□□ -2.03
CtcfQ61164 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CtcfQ61164 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CtcfQ61164 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CtcfQ61164 Gm24594-201ENSMUST00000122502 99 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm26026-201ENSMUST00000122726 123 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.39□□□□□ -2.03
CtcfQ61164 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.39□□□□□ -2.03
CtcfQ61164 Gm23466-201ENSMUST00000157133 106 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm25115-201ENSMUST00000157187 140 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm25863-201ENSMUST00000158249 329 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm27991-201ENSMUST00000184804 137 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Mir3069-201ENSMUST00000198802 65 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm19790-201ENSMUST00000214414 251 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Mir29c-201ENSMUST00000083614 88 ntBASIC2.39□□□□□ -2.03
CtcfQ61164 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CtcfQ61164 Gm24274-201ENSMUST00000116787 124 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Gm23551-201ENSMUST00000116852 121 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Gm13885-201ENSMUST00000117569 187 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.38□□□□□ -2.03
CtcfQ61164 Gm27271-201ENSMUST00000183509 170 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CtcfQ61164 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.38□□□□□ -2.03
CtcfQ61164 Gm43220-201ENSMUST00000199299 282 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CtcfQ61164 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
CtcfQ61164 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CtcfQ61164 Gm25538-201ENSMUST00000101943 107 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 Gm24892-201ENSMUST00000122747 104 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.37□□□□□ -2.03
CtcfQ61164 Gm24001-201ENSMUST00000158463 85 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms