Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm22450-201ENSMUST00000179641 107 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm25473-201ENSMUST00000180191 107 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm29604-201ENSMUST00000187176 163 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm45365-201ENSMUST00000209489 256 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm24856-201ENSMUST00000082809 107 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm26071-201ENSMUST00000083261 107 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Mir300-201ENSMUST00000083485 79 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm24521-201ENSMUST00000083958 107 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm25094-201ENSMUST00000103992 131 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm14846-201ENSMUST00000121868 216 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm25184-201ENSMUST00000157753 163 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm26468-201ENSMUST00000158644 106 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm25024-201ENSMUST00000179667 104 ntBASIC2.07□□□□□ -2.08
ClpbQ60649 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.07□□□□□ -2.08
ClpbQ60649 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ClpbQ60649 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.06□□□□□ -2.08
ClpbQ60649 Gm25664-201ENSMUST00000157697 107 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm24392-201ENSMUST00000158136 103 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm25491-201ENSMUST00000158733 308 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm24667-201ENSMUST00000158938 103 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm16162-201ENSMUST00000162296 297 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm22264-201ENSMUST00000178200 107 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Mir6336-201ENSMUST00000183581 130 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Mir466e-201ENSMUST00000198862 84 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Mir497-201ENSMUST00000200557 84 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm35736-201ENSMUST00000203681 313 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 Gm24204-201ENSMUST00000082950 107 ntBASIC2.06□□□□□ -2.08
ClpbQ60649 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm22935-201ENSMUST00000103960 104 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm12941-201ENSMUST00000117934 220 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm14491-201ENSMUST00000121919 199 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm23536-201ENSMUST00000157541 134 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm22011-201ENSMUST00000158790 123 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm22093-201ENSMUST00000158980 111 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm25235-201ENSMUST00000179933 107 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ClpbQ60649 Gm37557-201ENSMUST00000191640 139 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm42960-201ENSMUST00000202160 241 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.05□□□□□ -2.08
ClpbQ60649 Gm45907-201ENSMUST00000213023 193 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Snord118-201ENSMUST00000082965 135 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Snora69-201ENSMUST00000083708 131 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 Rny1-201ENSMUST00000083767 112 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.05□□□□□ -2.08
ClpbQ60649 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm26077-201ENSMUST00000104064 123 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm22784-201ENSMUST00000104088 132 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm12797-201ENSMUST00000118645 273 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.04□□□□□ -2.08
ClpbQ60649 Gm23219-201ENSMUST00000158123 87 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm22159-201ENSMUST00000158412 130 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm26405-201ENSMUST00000158495 100 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm25368-201ENSMUST00000158847 131 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.04□□□□□ -2.08
ClpbQ60649 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ClpbQ60649 Gm24044-201ENSMUST00000083107 156 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Mir429-201ENSMUST00000083493 83 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Mir30d-201ENSMUST00000083503 82 ntBASIC2.04□□□□□ -2.08
ClpbQ60649 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.03□□□□□ -2.08
ClpbQ60649 Gm24010-201ENSMUST00000157731 282 ntBASIC2.03□□□□□ -2.08
ClpbQ60649 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.03□□□□□ -2.08
ClpbQ60649 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.03□□□□□ -2.08
ClpbQ60649 Gm44352-201ENSMUST00000196358 110 ntBASIC2.03□□□□□ -2.08
ClpbQ60649 Gm25820-202ENSMUST00000197479 128 ntBASIC2.03□□□□□ -2.08
ClpbQ60649 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ClpbQ60649 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ClpbQ60649 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ClpbQ60649 Gm24440-201ENSMUST00000157236 63 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Gm22554-201ENSMUST00000157798 147 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Rnu7-201ENSMUST00000158458 62 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Gm24512-201ENSMUST00000174963 65 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Gm29657-201ENSMUST00000189807 342 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.02□□□□□ -2.09
ClpbQ60649 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ClpbQ60649 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Gm25402-201ENSMUST00000082966 131 ntBASIC2.02□□□□□ -2.09
ClpbQ60649 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
ClpbQ60649 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.01□□□□□ -2.09
ClpbQ60649 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
ClpbQ60649 Gm24079-201ENSMUST00000104352 132 ntBASIC2.01□□□□□ -2.09
ClpbQ60649 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.01□□□□□ -2.09
ClpbQ60649 Gm22097-201ENSMUST00000157929 278 ntBASIC2.01□□□□□ -2.09
ClpbQ60649 Gm23002-201ENSMUST00000179221 107 ntBASIC2.01□□□□□ -2.09
ClpbQ60649 Gm29022-201ENSMUST00000190702 225 ntBASIC2.01□□□□□ -2.09
ClpbQ60649 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms