Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm18188-201ENSMUST00000219386 478 ntBASIC2.59□□□□□ -1.99
Shroom1Q5SX79 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.59□□□□□ -1.99
Shroom1Q5SX79 Gm22704-201ENSMUST00000083027 137 ntBASIC2.59□□□□□ -1.99
Shroom1Q5SX79 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shroom1Q5SX79 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Shroom1Q5SX79 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Shroom1Q5SX79 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shroom1Q5SX79 Gm23223-201ENSMUST00000158119 127 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Gm24771-201ENSMUST00000158508 137 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Gm22011-201ENSMUST00000158790 123 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Mir7215-201ENSMUST00000200383 51 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shroom1Q5SX79 Gm44666-201ENSMUST00000208544 391 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Gm24355-201ENSMUST00000082858 122 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Mir146-201ENSMUST00000083667 65 ntBASIC2.58□□□□□ -2
Shroom1Q5SX79 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Shroom1Q5SX79 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm22151-201ENSMUST00000116963 58 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm12926-201ENSMUST00000121158 409 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm24896-201ENSMUST00000122741 135 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm23980-201ENSMUST00000157135 158 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm22535-201ENSMUST00000158174 119 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm24212-201ENSMUST00000158258 132 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm24210-201ENSMUST00000158263 133 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm22767-201ENSMUST00000158365 165 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm24053-201ENSMUST00000158620 105 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm24106-201ENSMUST00000175498 127 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm27991-201ENSMUST00000184804 137 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm27959-201ENSMUST00000185172 111 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm19901-201ENSMUST00000192191 495 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm26265-202ENSMUST00000196326 133 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm43626-201ENSMUST00000198575 162 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm20144-201ENSMUST00000203031 165 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm10360-201ENSMUST00000097219 272 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.57□□□□□ -2
Shroom1Q5SX79 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm23492-201ENSMUST00000116837 115 ntBASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm2830-201ENSMUST00000140330 385 ntBASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm23536-201ENSMUST00000157541 134 ntBASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm20613-201ENSMUST00000175828 345 ntBASIC2.56□□□□□ -2
Shroom1Q5SX79 Gm36189-201ENSMUST00000204113 523 ntBASIC2.56□□□□□ -2
Shroom1Q5SX79 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shroom1Q5SX79 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Shroom1Q5SX79 Gm26015-201ENSMUST00000104402 125 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 Gm25711-201ENSMUST00000158633 128 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.55□□□□□ -2
Shroom1Q5SX79 Gm5002-201ENSMUST00000207145 223 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.55□□□□□ -2
Shroom1Q5SX79 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.55□□□□□ -2
Shroom1Q5SX79 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm22989-201ENSMUST00000158313 86 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm25935-201ENSMUST00000178746 107 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Mir6353-201ENSMUST00000183596 113 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm27285-201ENSMUST00000183875 127 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Mir1291-201ENSMUST00000199842 117 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm44564-201ENSMUST00000207985 180 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm25124-201ENSMUST00000083345 164 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Snora34-201ENSMUST00000083402 138 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Mir384-201ENSMUST00000083565 88 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.54□□□□□ -2
Shroom1Q5SX79 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Shroom1Q5SX79 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shroom1Q5SX79 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Shroom1Q5SX79 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shroom1Q5SX79 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm22193-201ENSMUST00000116868 76 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm25961-201ENSMUST00000157174 135 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm25425-201ENSMUST00000157611 96 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shroom1Q5SX79 Mir6376-201ENSMUST00000185149 131 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm43993-201ENSMUST00000203972 247 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Gm8031-201ENSMUST00000213430 626 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Snord104-201ENSMUST00000083192 70 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 Mir302d-201ENSMUST00000083513 66 ntBASIC2.53□□□□□ -2
Shroom1Q5SX79 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Shroom1Q5SX79 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm24049-201ENSMUST00000102409 100 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm11786-201ENSMUST00000120799 155 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm25253-201ENSMUST00000179958 107 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm43563-201ENSMUST00000196761 198 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm44482-201ENSMUST00000199232 103 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.52□□□□□ -2.01
Shroom1Q5SX79 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm22299-201ENSMUST00000082663 136 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Gm25789-201ENSMUST00000083294 76 ntBASIC2.52□□□□□ -2.01
Shroom1Q5SX79 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Shroom1Q5SX79 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Shroom1Q5SX79 Gm26018-201ENSMUST00000104406 128 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms