Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.84□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm22163-201ENSMUST00000158408 135 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm34139-201ENSMUST00000196166 294 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm43220-201ENSMUST00000199299 282 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm43993-201ENSMUST00000203972 247 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm25357-201ENSMUST00000082745 72 ntBASIC0.83□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm15529-201ENSMUST00000121833 994 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm22279-201ENSMUST00000157200 93 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir1967-201ENSMUST00000157789 82 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24577-201ENSMUST00000158580 63 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24229-201ENSMUST00000158830 118 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm28597-201ENSMUST00000187664 666 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm10092-201ENSMUST00000077110 180 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir224-201ENSMUST00000083608 82 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm13475-201ENSMUST00000119290 234 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm13720-201ENSMUST00000120741 196 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm23466-201ENSMUST00000157133 106 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24005-201ENSMUST00000158459 296 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir1936-201ENSMUST00000158699 93 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm28288-201ENSMUST00000191019 214 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm23515-201ENSMUST00000082829 107 ntBASIC0.82□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm13967-201ENSMUST00000120404 380 ntBASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm42623-201ENSMUST00000197225 379 ntBASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24356-201ENSMUST00000082859 106 ntBASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir653-201ENSMUST00000102402 85 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm12225-201ENSMUST00000117995 298 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm14293-201ENSMUST00000118528 577 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm27957-201ENSMUST00000184054 127 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm22771-201ENSMUST00000104449 91 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir743b-201ENSMUST00000104751 77 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm25543-201ENSMUST00000122678 312 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm23994-201ENSMUST00000158059 88 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm37997-201ENSMUST00000193515 267 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm18854-201ENSMUST00000211196 329 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm46997-201ENSMUST00000222108 217 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24150-201ENSMUST00000082759 104 ntBASIC0.8□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm23013-201ENSMUST00000104146 106 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm14922-201ENSMUST00000121131 163 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm22166-201ENSMUST00000178419 121 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm23288-201ENSMUST00000179213 121 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir7j-201ENSMUST00000184427 122 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm26224-201ENSMUST00000082506 80 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.79□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm25414-201ENSMUST00000101814 107 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm16358-201ENSMUST00000146046 210 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm24777-201ENSMUST00000157644 107 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm27817-201ENSMUST00000184302 233 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm18185-201ENSMUST00000186725 667 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Gm38395-201ENSMUST00000199904 830 ntBASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.78□□□□□ -2.28
Ccdc88aQ5SNZ0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.78□□□□□ -2.29
Ccdc88aQ5SNZ0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.29
Ccdc88aQ5SNZ0 Mir293-201ENSMUST00000104841 80 ntBASIC0.78□□□□□ -2.29
Ccdc88aQ5SNZ0 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.78□□□□□ -2.29
Ccdc88aQ5SNZ0 Gm6025-201ENSMUST00000121517 201 ntBASIC0.78□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms