Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm24862-201ENSMUST00000179103 79 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm23310-201ENSMUST00000179105 79 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm25461-201ENSMUST00000179293 79 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm23516-201ENSMUST00000093728 107 ntBASIC-0.39□□□□□ -2.47
Trav3-1Q5R1I8 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm44548-201ENSMUST00000208929 192 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm45658-201ENSMUST00000209197 580 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm24625-201ENSMUST00000082622 130 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Mir448-201ENSMUST00000083516 112 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.4□□□□□ -2.47
Trav3-1Q5R1I8 Gm22597-201ENSMUST00000157602 80 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm24897-201ENSMUST00000179033 107 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Gm42164-201ENSMUST00000198881 379 ntBASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
Trav3-1Q5R1I8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm23000-201ENSMUST00000157083 139 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm22339-201ENSMUST00000157718 62 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm23340-201ENSMUST00000158955 123 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm25475-201ENSMUST00000082825 180 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm10780-201ENSMUST00000099459 285 ntBASIC-0.42□□□□□ -2.48
Trav3-1Q5R1I8 Gm26143-201ENSMUST00000104480 108 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.43□□□□□ -2.48
Trav3-1Q5R1I8 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm25838-201ENSMUST00000158920 120 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Gm25799-201ENSMUST00000082643 107 ntBASIC-0.44□□□□□ -2.48
Trav3-1Q5R1I8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Mir670-201ENSMUST00000102380 100 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Snord71-201ENSMUST00000104361 85 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Mir10b-201ENSMUST00000083566 68 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Gm23503-201ENSMUST00000083903 107 ntBASIC-0.45□□□□□ -2.48
Trav3-1Q5R1I8 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm11248-201ENSMUST00000119568 201 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm22565-201ENSMUST00000175540 69 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm26378-201ENSMUST00000179093 107 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.46□□□□□ -2.48
Trav3-1Q5R1I8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 AC124182.1-201ENSMUST00000227091 321 ntBASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.47□□□□□ -2.48
Trav3-1Q5R1I8 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Gm17054-201ENSMUST00000169811 259 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 Gm35212-201ENSMUST00000196672 606 ntBASIC-0.48□□□□□ -2.49
Trav3-1Q5R1I8 CT030684.2-201ENSMUST00000228946 826 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 151.3 ms