Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm25750-201ENSMUST00000175483 112 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm28848-201ENSMUST00000189984 168 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm34783-201ENSMUST00000209159 303 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm11351-202ENSMUST00000225724 478 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm14803-201ENSMUST00000117163 361 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22945-201ENSMUST00000158557 157 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm27236-201ENSMUST00000184147 442 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm28661-201ENSMUST00000188231 681 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm44921-201ENSMUST00000205290 301 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24625-201ENSMUST00000082622 130 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22884-201ENSMUST00000083127 140 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm26314-201ENSMUST00000083891 107 ntBASIC0.28□□□□□ -2.36
Trav8d-1Q5R1H8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm26278-201ENSMUST00000157098 132 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm22281-201ENSMUST00000157198 103 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm26501-201ENSMUST00000178307 107 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm45315-201ENSMUST00000209283 333 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23093-201ENSMUST00000083450 102 ntBASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
Trav8d-1Q5R1H8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm25416-201ENSMUST00000104221 107 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm11794-201ENSMUST00000119446 237 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm12433-201ENSMUST00000119659 255 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm11512-201ENSMUST00000119669 663 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm27817-201ENSMUST00000184302 233 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm28921-201ENSMUST00000190219 378 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm28926-201ENSMUST00000191063 680 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44325-201ENSMUST00000196757 77 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm43810-201ENSMUST00000201018 232 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm29817-201ENSMUST00000210098 172 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm22578-201ENSMUST00000083730 107 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23731-201ENSMUST00000083749 107 ntBASIC0.26□□□□□ -2.37
Trav8d-1Q5R1H8 Gm22591-201ENSMUST00000104243 106 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm14761-201ENSMUST00000121363 262 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm24191-201ENSMUST00000157977 122 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm28408-201ENSMUST00000191557 463 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44052-201ENSMUST00000203382 396 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm22704-201ENSMUST00000083027 137 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm25513-201ENSMUST00000083861 162 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.25□□□□□ -2.37
Trav8d-1Q5R1H8 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm24517-201ENSMUST00000122560 107 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm23542-201ENSMUST00000158208 96 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm27793-201ENSMUST00000183405 76 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm44395-201ENSMUST00000197056 153 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Gm25404-201ENSMUST00000082970 107 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Mir155-201ENSMUST00000083463 65 ntBASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.24□□□□□ -2.37
Trav8d-1Q5R1H8 Mir190b-201ENSMUST00000104803 80 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm14007-201ENSMUST00000118288 210 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm14846-201ENSMUST00000121868 216 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm22733-201ENSMUST00000158094 91 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm37918-201ENSMUST00000192071 120 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm37641-201ENSMUST00000193837 239 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm24523-201ENSMUST00000083965 132 ntBASIC0.23□□□□□ -2.37
Trav8d-1Q5R1H8 Gm14568-201ENSMUST00000119321 294 ntBASIC0.22□□□□□ -2.37
Trav8d-1Q5R1H8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.22□□□□□ -2.37
Trav8d-1Q5R1H8 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.22□□□□□ -2.37
Trav8d-1Q5R1H8 Gm21894-201ENSMUST00000179631 546 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms