Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22704-201ENSMUST00000083027 137 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm25582-201ENSMUST00000083412 110 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm11794-201ENSMUST00000119446 237 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm14846-201ENSMUST00000121868 216 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm45704-201ENSMUST00000212582 403 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 CT009550.5-201ENSMUST00000226286 382 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm24707-201ENSMUST00000082812 107 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm24268-201ENSMUST00000082990 110 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm24490-201ENSMUST00000083803 98 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm24523-201ENSMUST00000083965 132 ntBASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
Trav5d-4Q5R1F6 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm23321-201ENSMUST00000104465 126 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26303-201ENSMUST00000116845 119 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm13729-201ENSMUST00000120328 406 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm14269-201ENSMUST00000120455 306 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26149-201ENSMUST00000157432 108 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Mir7039-201ENSMUST00000183852 85 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm20257-202ENSMUST00000188643 130 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm29350-201ENSMUST00000189141 541 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm28921-201ENSMUST00000190219 378 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44990-201ENSMUST00000203922 217 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm23055-201ENSMUST00000082805 94 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26326-201ENSMUST00000083070 129 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm25138-201ENSMUST00000083248 136 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26314-201ENSMUST00000083891 107 ntBASIC0.25□□□□□ -2.37
Trav5d-4Q5R1F6 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm25416-201ENSMUST00000104221 107 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm14803-201ENSMUST00000117163 361 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm6272-201ENSMUST00000121256 171 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm23542-201ENSMUST00000158208 96 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Mir6389-201ENSMUST00000183661 102 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44325-201ENSMUST00000196757 77 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm17906-201ENSMUST00000202480 901 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm45315-201ENSMUST00000209283 333 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm23093-201ENSMUST00000083450 102 ntBASIC0.24□□□□□ -2.37
Trav5d-4Q5R1F6 Gm14568-201ENSMUST00000119321 294 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26278-201ENSMUST00000157098 132 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm16546-201ENSMUST00000159442 355 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm9593-201ENSMUST00000166034 469 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm28408-201ENSMUST00000191557 463 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm37918-201ENSMUST00000192071 120 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm24966-201ENSMUST00000082443 79 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm22572-201ENSMUST00000082985 105 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Mir155-201ENSMUST00000083463 65 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.23□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm14761-201ENSMUST00000121363 262 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm26501-201ENSMUST00000178307 107 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm27793-201ENSMUST00000183405 76 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm27313-201ENSMUST00000183500 142 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44052-201ENSMUST00000203382 396 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Mir324-201ENSMUST00000083600 89 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm25513-201ENSMUST00000083861 162 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.22□□□□□ -2.37
Trav5d-4Q5R1F6 Gm11512-201ENSMUST00000119669 663 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Gm22706-201ENSMUST00000157907 112 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24963-201ENSMUST00000157916 144 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Mir1961-201ENSMUST00000158643 112 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24111-201ENSMUST00000175491 97 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms