Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm23379-201ENSMUST00000180026 107 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm28597-201ENSMUST00000187664 666 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm23390-201ENSMUST00000157393 106 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm16038-201ENSMUST00000159317 193 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm26430-201ENSMUST00000178054 107 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm27517-201ENSMUST00000184347 236 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm19777-201ENSMUST00000191940 358 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm19901-201ENSMUST00000192191 495 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm36953-201ENSMUST00000195295 268 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm43220-201ENSMUST00000199299 282 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm43993-201ENSMUST00000203972 247 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm18696-201ENSMUST00000220103 274 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm25589-201ENSMUST00000082502 166 ntBASIC0.76□□□□□ -2.29
Col27a1Q5QNQ9 Gm24338-201ENSMUST00000104205 127 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm11606-201ENSMUST00000120706 617 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm15214-201ENSMUST00000122155 470 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm24409-201ENSMUST00000157881 152 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm23208-201ENSMUST00000158666 127 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm27817-201ENSMUST00000184302 233 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm27624-201ENSMUST00000185047 177 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm37337-201ENSMUST00000192601 993 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm5010-201ENSMUST00000213131 260 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm6025-201ENSMUST00000121517 201 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm23277-201ENSMUST00000157914 136 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm24191-201ENSMUST00000157977 122 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm27539-201ENSMUST00000184971 224 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Gm38395-201ENSMUST00000199904 830 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.75□□□□□ -2.29
Col27a1Q5QNQ9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm16242-201ENSMUST00000117741 334 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm15529-201ENSMUST00000121833 994 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm11254-201ENSMUST00000122368 653 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm24381-201ENSMUST00000122697 104 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm24366-201ENSMUST00000175383 86 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm27980-201ENSMUST00000184094 169 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Mir6419-201ENSMUST00000184784 113 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm44655-201ENSMUST00000207768 423 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm45616-201ENSMUST00000211711 319 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm45704-201ENSMUST00000212582 403 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.74□□□□□ -2.29
Col27a1Q5QNQ9 Mir1936-201ENSMUST00000158699 93 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm22802-201ENSMUST00000175621 89 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm25314-201ENSMUST00000178810 79 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm26200-201ENSMUST00000180273 79 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm29013-201ENSMUST00000187431 237 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm43035-201ENSMUST00000197626 517 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm12433-201ENSMUST00000119659 255 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm11891-201ENSMUST00000121241 619 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm15899-201ENSMUST00000128586 238 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm26038-201ENSMUST00000158151 106 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm22163-201ENSMUST00000158408 135 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm38060-201ENSMUST00000194822 464 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm26265-202ENSMUST00000196326 133 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm24536-201ENSMUST00000083144 107 ntBASIC0.73□□□□□ -2.29
Col27a1Q5QNQ9 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Mir1b-201ENSMUST00000117012 122 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Gm23016-201ENSMUST00000158431 62 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Gm28414-201ENSMUST00000190111 294 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Gm35736-201ENSMUST00000203681 313 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 Gm44811-201ENSMUST00000209120 228 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.72□□□□□ -2.29
Col27a1Q5QNQ9 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms