Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim41Q5NCC3 Mir547-201ENSMUST00000102051 78 ntBASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Gm16171-201ENSMUST00000118004 324 ntBASIC5.88□□□□□ -1.47
Trim41Q5NCC3 AC158597.1-201ENSMUST00000216234 150 ntBASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Gm25589-201ENSMUST00000082502 166 ntBASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Gm24099-201ENSMUST00000083384 107 ntBASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim41Q5NCC3 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC5.87□□□□□ -1.47
Trim41Q5NCC3 AC157572.3-201ENSMUST00000227288 303 ntBASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Mir7-1-201ENSMUST00000083500 108 ntBASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim41Q5NCC3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm42448-201ENSMUST00000197122 2644 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm26342-201ENSMUST00000104557 129 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm22193-201ENSMUST00000116868 76 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm22322-201ENSMUST00000157151 111 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm25059-201ENSMUST00000157367 117 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm22651-201ENSMUST00000157872 94 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm25642-201ENSMUST00000175137 66 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Gm14416-201ENSMUST00000118630 2308 ntBASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim41Q5NCC3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Gm23567-201ENSMUST00000178005 107 ntBASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Mir3569-201ENSMUST00000185080 58 ntBASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim41Q5NCC3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Gm38071-201ENSMUST00000195792 3378 ntBASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Gm25828-201ENSMUST00000157087 95 ntBASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Gm16584-201ENSMUST00000159267 189 ntBASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Gm27505-201ENSMUST00000185071 110 ntBASIC5.84□□□□□ -1.47
Trim41Q5NCC3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim41Q5NCC3 Gm26076-201ENSMUST00000104065 105 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm23654-201ENSMUST00000116758 126 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Mir1198-201ENSMUST00000116995 121 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm22067-201ENSMUST00000122790 107 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm23859-201ENSMUST00000158383 64 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 AC154297.1-201ENSMUST00000171334 397 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm24350-202ENSMUST00000198309 132 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Mir1291-201ENSMUST00000199842 117 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Snora34-201ENSMUST00000083402 138 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm25581-201ENSMUST00000083410 164 ntBASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim41Q5NCC3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC5.82□□□□□ -1.48
Trim41Q5NCC3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim41Q5NCC3 Gm25112-201ENSMUST00000122680 104 ntBASIC5.82□□□□□ -1.48
Trim41Q5NCC3 Gm27869-201ENSMUST00000184327 122 ntBASIC5.82□□□□□ -1.48
Trim41Q5NCC3 AC125167.1-201ENSMUST00000198698 141 ntBASIC5.82□□□□□ -1.48
Trim41Q5NCC3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim41Q5NCC3 Gm45558-201ENSMUST00000209384 1895 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Gm25012-201ENSMUST00000158396 164 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Gm28270-201ENSMUST00000188550 109 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Gm28328-201ENSMUST00000188869 109 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 AC167669.1-201ENSMUST00000224932 384 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 AC155167.3-201ENSMUST00000226349 217 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Mir103-2-201ENSMUST00000083629 86 ntBASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim41Q5NCC3 Gm15190-201ENSMUST00000120855 276 ntBASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Gm23665-201ENSMUST00000158054 62 ntBASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Gm22129-201ENSMUST00000179034 107 ntBASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Trim41Q5NCC3 Gm45264-201ENSMUST00000210090 3995 ntBASIC5.8□□□□□ -1.48
Trim41Q5NCC3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm13687-201ENSMUST00000119857 282 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm24908-201ENSMUST00000157294 127 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm22079-201ENSMUST00000157592 106 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm25382-201ENSMUST00000157811 97 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm23559-201ENSMUST00000157824 103 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Snord11-201ENSMUST00000158468 84 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm25978-201ENSMUST00000158698 90 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Mir378a-201ENSMUST00000198300 66 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Gm44521-201ENSMUST00000206469 217 ntBASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim41Q5NCC3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 191.1 ms