Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm9156-201ENSMUST00000189660 463 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.36□□□□□ -2.19
Usp28Q5I043 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm25509-201ENSMUST00000116985 106 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm12647-201ENSMUST00000118977 265 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm8121-201ENSMUST00000153583 499 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm22075-201ENSMUST00000158599 192 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm26363-201ENSMUST00000158866 83 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Mir6388-201ENSMUST00000184417 75 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Mir376a-201ENSMUST00000197584 68 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm43035-201ENSMUST00000197626 517 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm43220-201ENSMUST00000199299 282 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm44473-201ENSMUST00000204039 152 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Gm23100-201ENSMUST00000083455 141 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.35□□□□□ -2.19
Usp28Q5I043 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Usp28Q5I043 Mir223-201ENSMUST00000102112 110 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm26080-201ENSMUST00000104069 131 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm24629-201ENSMUST00000122762 89 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm26150-201ENSMUST00000157426 151 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm23670-201ENSMUST00000157469 119 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm22215-201ENSMUST00000157558 96 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm24851-201ENSMUST00000158028 103 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm25491-201ENSMUST00000158733 308 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm22862-201ENSMUST00000178593 121 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm25730-201ENSMUST00000178753 165 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm28992-201ENSMUST00000190534 139 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm36946-201ENSMUST00000192706 435 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm44491-201ENSMUST00000196794 96 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm22980-201ENSMUST00000082608 70 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm24625-201ENSMUST00000082622 130 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Snord118-201ENSMUST00000082965 135 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm26493-201ENSMUST00000083155 136 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Gm25512-201ENSMUST00000083863 107 ntBASIC1.34□□□□□ -2.19
Usp28Q5I043 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
Usp28Q5I043 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Usp28Q5I043 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.33□□□□□ -2.2
Usp28Q5I043 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm15861-201ENSMUST00000120979 339 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm22082-201ENSMUST00000157587 161 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm25914-201ENSMUST00000157618 153 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm26089-201ENSMUST00000157898 107 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm25333-201ENSMUST00000158035 246 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Mir6419-201ENSMUST00000184784 113 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm42834-201ENSMUST00000196845 256 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm45456-201ENSMUST00000210841 243 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm45907-201ENSMUST00000213023 193 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm24536-201ENSMUST00000083144 107 ntBASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Usp28Q5I043 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Usp28Q5I043 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.32□□□□□ -2.2
Usp28Q5I043 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm25541-201ENSMUST00000116888 126 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm12143-201ENSMUST00000119666 332 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm22559-201ENSMUST00000157329 134 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm22814-201ENSMUST00000157452 104 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm22537-201ENSMUST00000158172 199 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Mir3057-201ENSMUST00000175040 91 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm25035-201ENSMUST00000175414 77 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm27640-201ENSMUST00000184580 147 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm27540-201ENSMUST00000184950 187 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm29147-201ENSMUST00000186846 315 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm29227-201ENSMUST00000187139 315 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm29034-201ENSMUST00000188099 315 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm28160-201ENSMUST00000191229 315 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm37129-201ENSMUST00000195791 315 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.32□□□□□ -2.2
Usp28Q5I043 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm25357-201ENSMUST00000082745 72 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Snord14a-201ENSMUST00000082807 87 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Snora3-201ENSMUST00000083082 132 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Gm26111-201ENSMUST00000083969 106 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.32□□□□□ -2.2
Usp28Q5I043 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm23013-201ENSMUST00000104146 106 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm6025-201ENSMUST00000121517 201 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm12924-201ENSMUST00000121747 318 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 200 ms