Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm44602-201ENSMUST00000205948 132 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm44961-201ENSMUST00000207450 196 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 CT954323.1-201ENSMUST00000222774 229 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Mir374b-201ENSMUST00000102314 95 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm44491-201ENSMUST00000196794 96 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm19032-201ENSMUST00000208584 592 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 CT010506.2-201ENSMUST00000225618 183 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm22884-201ENSMUST00000083127 140 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Snord69-201ENSMUST00000104024 80 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm25059-201ENSMUST00000157367 117 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm25185-201ENSMUST00000157754 96 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm24726-201ENSMUST00000158232 121 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Mir1933-201ENSMUST00000158930 88 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm23159-201ENSMUST00000175088 77 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm25750-201ENSMUST00000175483 112 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Gm37313-201ENSMUST00000191673 290 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 AC156795.1-201ENSMUST00000214655 414 ntBASIC-1.06□□□□□ -2.58
Ccdc88bQ4QRL3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm24500-201ENSMUST00000158447 124 ntBASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm35212-201ENSMUST00000196672 606 ntBASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm43914-201ENSMUST00000203592 594 ntBASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 AC158606.1-201ENSMUST00000220078 325 ntBASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm24615-201ENSMUST00000083268 113 ntBASIC-1.07□□□□□ -2.58
Ccdc88bQ4QRL3 Gm23463-201ENSMUST00000122468 99 ntBASIC-1.08□□□□□ -2.58
Ccdc88bQ4QRL3 Gm22838-201ENSMUST00000158437 99 ntBASIC-1.08□□□□□ -2.58
Ccdc88bQ4QRL3 Gm24390-201ENSMUST00000179578 62 ntBASIC-1.08□□□□□ -2.58
Ccdc88bQ4QRL3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC-1.08□□□□□ -2.58
Ccdc88bQ4QRL3 Gm17132-201ENSMUST00000109542 1158 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm22914-201ENSMUST00000175195 77 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm35843-201ENSMUST00000193716 666 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm19790-201ENSMUST00000214414 251 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 AC116460.1-201ENSMUST00000219040 313 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 AC159203.2-201ENSMUST00000221326 193 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC-1.09□□□□□ -2.58
Ccdc88bQ4QRL3 Gm8858-201ENSMUST00000118259 342 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Gm14368-201ENSMUST00000145305 415 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Gm23542-201ENSMUST00000158208 96 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Gm23387-201ENSMUST00000158586 107 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Mir3112-201ENSMUST00000175431 82 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Mir3065-201ENSMUST00000198674 87 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Gm22972-201ENSMUST00000083297 131 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 n-R5s12-201ENSMUST00000083785 119 ntBASIC-1.1□□□□□ -2.59
Ccdc88bQ4QRL3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Snord89-201ENSMUST00000104516 110 ntBASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm15266-201ENSMUST00000119635 255 ntBASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 AC163033.1-201ENSMUST00000218608 157 ntBASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm23650-201ENSMUST00000083355 70 ntBASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm25894-201ENSMUST00000083458 75 ntBASIC-1.11□□□□□ -2.59
Ccdc88bQ4QRL3 Gm22545-201ENSMUST00000104350 132 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm12779-201ENSMUST00000121496 143 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm13967-201ENSMUST00000120404 380 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 n-R5s188-201ENSMUST00000122646 105 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-1.12□□□□□ -2.59
Ccdc88bQ4QRL3 Gm12591-201ENSMUST00000122407 1177 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm24409-201ENSMUST00000157881 152 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm18340-201ENSMUST00000196342 609 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 AC115735.2-201ENSMUST00000227135 351 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Mir340-201ENSMUST00000083483 98 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Mir96-201ENSMUST00000083652 106 ntBASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-1.13□□□□□ -2.59
Ccdc88bQ4QRL3 Gm26339-201ENSMUST00000102368 99 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm14517-201ENSMUST00000119040 337 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm14887-201ENSMUST00000119522 663 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Mir344-2-201ENSMUST00000175446 80 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm28412-201ENSMUST00000187243 177 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 AC156560.1-201ENSMUST00000221425 256 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm22303-201ENSMUST00000082686 122 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm25257-201ENSMUST00000083907 110 ntBASIC-1.14□□□□□ -2.59
Ccdc88bQ4QRL3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms